Reactions
| WID | Name |
|---|---|
| DNADamage_THY_DHTHY_hydrogen_radical | DNA base reduction (thymine ==> 5,6-dihydrothymine; hydrogen radical) |
Filter
Type
- All
- Adduction (62)
- Aminoacylation (37)
- Base alkylation (7)
- Base amination (3)
- Base ethylation (39)
- Base excision repair (4)
- Base excision repair, base excision (6)
- Base glucosyl transfer (2)
- Base methylation (42)
- Base reduction (1)
- Chemical (441)
- DNA cleavage (4)
- DNA ligation (1)
- DNA polymerization (4)
- DNA restriction/modification (4)
- Homologous recombination (7)
- Ligation (1)
- Nucleotide excision repair (2)
- Photooxidation (2)
- Radiation (gamma-ray) induced base oxidation (19)
- Spontaneous base deamination (4)
- Spontaneous base loss (4)
- Strand break (2)
- Transfer (2)
- Transport (204)
- UV-B photodimerization (12)
Direction
Enzyme › Protein
- All
- (4)
- 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative (7)
- 1-phosphofructokinase, putative (1)
- 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (1)
- 23S rRNA methyltransferase (1)
- 23S rRNA methyltransferase (1)
- 23S rRNA pseudouridine synthase; U1911, U1915, U1917 (2)
- 23S rRNA pseudouridine synthase; U955, U2504, U2580 (2)
- 3-5' helicase (1)
- 5-formyltetrahydrofolate cyclo-ligase, putative (1)
- 6-phosphofructokinase (5)
- 70S ribosome (20)
- Acetate kinase (1)
- Adenine phosphoribosyltransferase (1)
- Adenine-specific DNA modification methylase (1)
- Adenylate kinase (5)
- Alanyl-tRNA synthetase (2)
- Alpha-L-glutamate ligase (1)
- Amino acid transporter (3)
- Amino acid transporter (3)
- Apurinic endonuclease (2)
- Arginine deaminase (1)
- Arginyl-tRNA synthetase (4)
- Asparaginyl-tRNA synthetase (1)
- Aspartyl-tRNA synthetase (1)
- ATP-dependent metalloprotease FtsH (20)
- ATP-dependent protease La (20)
- ATP-dependent RNA helicase (4)
- ATPase, P-type (transporting), HAD superfamily, subfamily IC (8)
- CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (3)
- Choline/ethanolamine kinase, putative (1)
- CobQ/CobB/MinD/ParA nucleotide binding domain (1)
- Cysteine desulfurase (1)
- Cysteinyl-tRNA synthetase (1)
- Cytidine deaminase (2)
- Cytidylate kinase (2)
- DAK2 phosphatase domain protein (1)
- Deoxyribonuclease (4)
- Deoxyribose-phosphate aldolase (1)
- Dephospho-CoA kinase (1)
- Dihydrofolate reductase (2)
- Dimethyladenosine transferase (4)
- DNA gyrase (1)
- DNA incision complex (1)
- DNA internalization-related competence protein ComEC/Rec2 (4)
- DNA ligase, NAD-dependent (2)
- DNA polymerase III, beta subunit (5)
- DNA primase (4)
- DNA topoisomerase I (1)
- DNA-directed DNA polymerase (4)
- DNA-directed RNA polymerase (4)
- Enolase (1)
- FAD-dependent glycerol-3-phosphate dehydrogenase, putative (1)
- Fatty acid/phospholipid synthesis protein PlsX (7)
- FMN-dependent NADH-azoreductase, putative (1)
- Formamidopyrimidine-DNA glycosylase (5)
- Fructose-1,6-bisphosphate aldolase, class II (1)
- Glucose-6-phosphate isomerase (1)
- Glutamyl-tRNA synthetase (2)
- Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase (1)
- Glyceraldehyde-3-phosphate dehydrogenase, type I (1)
- Glycerol kinase (1)
- Glycerol uptake facilitator (1)
- Glycerophosphoryl diester phosphodiesterase family protein (5)
- Glycerophosphoryl diester phosphodiesterase family protein (5)
- Glycosyl transferase, group 2 family protein (42)
- Glycyl-tRNA synthetase (2)
- GTP pyrophosphokinase (2)
- GTP-binding protein engA (1)
- GTP-binding protein engB, putative (1)
- GTP-binding protein Era (2)
- GTPase1 Obg (2)
- Guanylate kinase (5)
- H(+)-transporting two-sector ATPase (1)
- High molecular weight cytadherence accessory protein 1 (5)
- High molecular weight cytadherence accessory protein 2 (2)
- High molecular weight cytadherence accessory protein 3 (1)
- Histidyl-tRNA synthetase (1)
- Holliday junction DNA helicase (1)
- Holliday junction endonuclease (1)
- Holo-(acyl-carrier-protein) synthase (1)
- Hydrolase, Putative esterase/lipase 1 (12)
- Hydrolase, Putative esterase/lipase 2 (12)
- Hydrolase, Putative esterase/lipase 3 (12)
- Hypoxanthine phosphoribosyltransferase (2)
- Inorganic polyphosphate/ATP-NAD kinase, probable (1)
- Inorganic pyrophosphatase (1)
- Isoleucyl-tRNA synthetase (2)
- L-lactate dehydrogenase/malate dehydrogenase (2)
- Leucyl-tRNA synthetase (4)
- Lipoyltransferase/lipoate-protein ligase, putative (2)
- Lysyl-tRNA synthetase (2)
- Metal ion (cobalt) ABC transporter (1)
- Metal ion (cobalt) ABC transporter (1)
- Methionine aminopeptidase, type I (1)
- Methionine-R-sulfoxide reductase (1)
- Methionine-S-sulfoxide reductase (1)
- Methionyl-tRNA formyltransferase (1)
- Methionyl-tRNA synthetase (2)
- Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase (3)
- Methyltransferase GidB (1)
- Modification methylase (1)
- Monosaccharide (riboside/galactoside) ABC transporter (1)
- MraZ protein (1)
- Multidrug ABC transporter (1)
- Multidrug efflux pump (14)
- Mycoplasma MFS transporter (3)
- NADH oxidase (1)
- NADPH-dependent FMN reductase domain protein (4)
- NH(3)-dependent NAD+ synthetase, putative (1)
- Nicotinamide-nucleotide adenylyltransferase/conserved hypothetical protein (2)
- Nicotinate phosphoribosyltransferase (1)
- Oligopeptide ABC transporter (20)
- Oligosaccharide or polyol ABC transporter (2)
- P32 adhesin (1)
- Peptide deformylase (1)
- Peptidyl-tRNA hydrolase (21)
- Phenylalanyl-tRNA synthetase (1)
- Phosphate ABC transporter (1)
- Phosphate acetyltransferase (1)
- Phosphatidate cytidylyltransferase (7)
- Phosphoesterase (4)
- Phosphoglucomutase/phosphomannomutase, putative (3)
- Phosphoglycerate kinase (5)
- Phosphonate ABC transporter (1)
- PolI-like 5'-3' exonuclease, putative (4)
- Potassium uptake protein, TrkH family, putative (2)
- Preprotein translocase, SecA subunit (1)
- Prolipoprotein diacylglyceryl transferase (1)
- Prolyl-tRNA synthetase (1)
- Pseudouridylate synthase (15)
- PTS system, fructose-specific (1)
- PTS system, glucose-specific (1)
- Purine nucleoside phosphorylase (7)
- Putative DNA integrity scanning protein (1)
- Pyrimidine-nucleoside phosphorylase (2)
- Pyruvate dehydrogenase (1)
- Pyruvate kinase (11)
- Recombination protein, strand exchange (1)
- Replicative DNA helicase (1)
- Riboflavin biosynthesis protein RibF (2)
- Ribonuclease III (4)
- Ribonuclease J (4)
- Ribonuclease P (4)
- Ribonuclease R (4)
- Ribonucleoside-diphosphate reductase (4)
- Ribonucleotide reductase stimulatory protein (1)
- Ribose 5-phosphate isomerase B (1)
- Ribose-phosphate pyrophosphokinase (1)
- Ribosomal biogenesis GTPase (1)
- Ribosome small subunit-dependent GTPase A (4)
- Ribosome-binding factor A (1)
- Ribulose-phosphate 3-epimerase (1)
- S-adenosylmethionine synthetase (1)
- Salivaricin A ABC transporter (1)
- Serine hydroxymethyltransferase (2)
- Serine/threonine protein kinase, putative (61)
- Seryl-tRNA synthetase (4)
- Signal recognition particle (1)
- Spermidine/putrescine (polyamine) ABC transporter (2)
- Sugar phosphatase (8)
- Thiamine biosynthesis/tRNA modification protein ThiI (37)
- Thioredoxin-disulfide reductase (1)
- Threonyl-tRNA synthetase (3)
- Thymidine kinase (2)
- Thymidylate kinase (1)
- Thymidylate synthase (1)
- Topoisomerase IV (1)
- Toxin ABC transporter, ATP-binding/permease protein (1)
- Transketolase (2)
- Triosephosphate isomerase (1)
- TRNA (guanine-N(7)-)-methyltransferase (18)
- TRNA (guanine-N1)-methyltransferase (4)
- TRNA U34 sulfurtransferase (3)
- TRNA uridine 5-carboxymethylaminomethyl modification enzyme (3)
- TRNA(Ile)-lysidine synthetase (1)
- Tryptophanyl-tRNA synthetase (2)
- Type I restriction modification DNA specificity domain protein (2)
- Tyrosyl-tRNA synthetase (1)
- UDP-galactopyranose mutase (1)
- UDP-glucose 4-epimerase (1)
- Uracil phosphoribosyltransferase (1)
- Uracil-DNA glycosylase, putative (2)
- Uridine kinase (2)
- Uridylate kinase (1)
- UTP-glucose-1-phosphate uridylyltransferase (1)
- Valyl-tRNA synthetase (1)
Coenzymes › Metabolite
Is spontaneous (pH 7.5, 25C, I = 0)
Pathways
- All
- Alanine and aspartate metabolism (2)
- Alternate carbon metabolism (8)
- Anaplerotic reactions (2)
- Arginine and proline metabolism (2)
- Cell envelope biosynthesis (9)
- Citric acid cycle (1)
- Cofactor and prosthetic group biosynthesis (18)
- Folate metabolism (5)
- Glycerophospholipid metabolism (40)
- Glycolysis/gluconeogenesis (28)
- Inner membrane transport (31)
- Inorganic ion transport and metabolism (3)
- Oxidative phosphorylation (2)
- Pentose phosphate pathway (non-oxidative branch) (5)
- Purine and pyrimidine nucleotide salvage (46)
- Pyruvate metabolism (3)
- Tyrosine, tryptophan, and phenylalanine metabolism (2)
Process
- All
- Chromosome Condensation (1)
- Chromosome Segregation (4)
- Cytokinesis (1)
- DNA damage (137)
- DNA repair (32)
- DNA supercoiling (3)
- FtsZ Polymerization (10)
- Metabolism (645)
- Protein decay (40)
- Protein modification (63)
- Protein processing I (2)
- Protein processing II (1)
- Protein translocation (2)
- Replication (10)
- Replication Initiation (15)
- Ribosome assembly (6)
- RNA decay (25)
- RNA modification (91)
- RNA processing (20)
- Terminal organelle assembly (10)
- Transcription (4)
- Translation (20)
- TRNA aminoacylation (39)
