hm5dUMP – 5-hydroxymethyl-2'-deoxyuridine monophosphate
| Name | ||
|---|---|---|
| WID | hm5dUMP |
|
| Name | 5-hydroxymethyl-2'-deoxyuridine monophosphate |
|
| Traditional name | {3-hydroxy-5-[5-(hydroxymethyl)-2,4-dioxo-3H-pyrimidin-1-yl]oxolan-2-yl}methyl phosphate | |
| IUPAC name | {3-hydroxy-5-[5-(hydroxymethyl)-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl]oxolan-2-yl}methyl phosphate | |
| Cross references | PubChem: 80115916 | |
| Classification | ||
| Type | modified_deoxyribonucleotide_monophosphate |
|
| Structure | ||
| Empirical formula (pH 7.5) | H13C10N2O9P1 | |
| SMILES (pH 7.5) | OCC1=CN(C2CC(O)C(COP([O-])([O-])=O)O2)C(=O)NC1=O | |
| Charge (pH 7.5) | -2 | |
| Is hydrophobic | False |
|
| Molecular weight (Da) | 336.19 |
|
| van der Waals volume (pH 7.5; Å3 molecule‑1) |
254.71 | |
| logP | -2.52 | |
| logD (pH 7.5) | -5.87 | |
| Function | ||
| Reaction participant | 5'-nucleotidase (5-hydroxymethyl-2'-deoxyuridine monophosphate) [c]: H2O + hm5dUMP ⇒ hm5dU + PI |
|
| Metadata | ||
| Created | 2012-10-01 15:07:00 | |
| Last updated | 2012-10-01 15:12:15 | |
