hm5dCMP – 5'-hydroxymethyl-2'-deoxycytidine monophosphate
| Name | ||
|---|---|---|
| WID | hm5dCMP |
|
| Name | 5'-hydroxymethyl-2'-deoxycytidine monophosphate |
|
| Traditional name | {5-[4-amino-5-(hydroxymethyl)-2-oxopyrimidin-1-yl]-3-hydroxyoxolan-2-yl}methyl phosphate | |
| IUPAC name | {5-[4-amino-5-(hydroxymethyl)-2-oxo-1,2-dihydropyrimidin-1-yl]-3-hydroxyoxolan-2-yl}methyl phosphate | |
| Classification | ||
| Type | modified_deoxyribonucleotide_monophosphate |
|
| Structure | ||
| Empirical formula (pH 7.5) | H14C10N3O8P1 | |
| SMILES (pH 7.5) | NC1=NC(=O)N(C=C1CO)C1CC(O)C(COP([O-])([O-])=O)O1 | |
| Charge (pH 7.5) | -2 | |
| Is hydrophobic | False |
|
| Molecular weight (Da) | 335.21 |
|
| van der Waals volume (pH 7.5; Å3 molecule‑1) |
258.16 | |
| pI | 0.270 | |
| logP | -2.91 | |
| logD (pH 7.5) | -6.25 | |
| Function | ||
| Reaction participant | 5'-nucleotidase (5'-hydroxymethyl-2'-deoxycytidine monophosphate) [c]: H2O + hm5dCMP ⇒ hm5dC + PI |
|
| Metadata | ||
| Created | 2012-10-01 15:07:00 | |
| Last updated | 2012-10-01 15:12:15 | |
