glchm5dCMP – beta-D-glucosylhydroxymethyl-2'-deoxycytidine monophosphate
| Name | ||
|---|---|---|
| WID | glchm5dCMP |
|
| Name | beta-D-glucosylhydroxymethyl-2'-deoxycytidine monophosphate |
|
| Traditional name | {5-[4-amino-2-oxo-5-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)pyrimidin-1-yl]-3-hydroxyoxolan-2-yl}methyl phosphate | |
| IUPAC name | {5-[4-amino-2-oxo-5-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-1,2-dihydropyrimidin-1-yl]-3-hydroxyoxolan-2-yl}methyl phosphate | |
| Classification | ||
| Type | modified_deoxyribonucleotide_monophosphate |
|
| Structure | ||
| Empirical formula (pH 7.5) | H24C16N3O13P1 | |
| SMILES (pH 7.5) | NC1=NC(=O)N(C=C1COC1OC(CO)C(O)C(O)C1O)C1CC(O)C(COP([O-])([O-])=O)O1 | |
| Charge (pH 7.5) | -2 | |
| Is hydrophobic | False |
|
| Molecular weight (Da) | 497.35 |
|
| van der Waals volume (pH 7.5; Å3 molecule‑1) |
393.14 | |
| pI | 0.180 | |
| logP | -4.68 | |
| logD (pH 7.5) | -8.03 | |
| Function | ||
| Reaction participant | 5'-nucleotidase (beta-D-glucosylhydroxymethyl-2'-deoxycytidine monophosphate) [c]: glchm5dCMP + H2O ⇒ glchm5dC + PI |
|
| Metadata | ||
| Created | 2012-10-01 15:06:59 | |
| Last updated | 2012-10-01 15:12:12 | |
