dhpdU – 5'-dihydroxypentyl-2'-deoxyuridine
Name | ||
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WID | dhpdU |
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Name | 5'-dihydroxypentyl-2'-deoxyuridine |
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Traditional name | 5-(4,5-dihydroxypentyl)-1-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-pyrimidine-2,4-dione | |
IUPAC name | 5-(4,5-dihydroxypentyl)-1-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2,3,4-tetrahydropyrimidine-2,4-dione | |
Classification | ||
Type | modified_deoxyribonucleoside |
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Structure | ||
Empirical formula (pH 7.5) | H22C14N2O7 | |
SMILES (pH 7.5) | C1=C(C(N(C(N1C2OC(C(C2)O)CO)=O)[H])=O)CCCC(O)CO | |
Charge (pH 7.5) | 0 | |
Is hydrophobic | False |
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Molecular weight (Da) | 330.33 |
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van der Waals volume (pH 7.5; Å3 molecule‑1) |
291.27 | |
pI | 3.74 | |
logP | -1.85 | |
logD (pH 7.5) | -1.85 | |
Function | ||
Reaction participant |
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Comments | ||
Comments | occurs in bacteriophage DNA [PUB_0477]; in bacteriophage SP15 up to 60% thymidine replaced by dhpdU [PUB_0478]; | |
References | ||
Metadata | ||
Created | 2012-10-01 15:06:54 | |
Last updated | 2012-10-01 15:12:03 |