MG_326 – degV family protein

Name
WID MG_326 View in model
Name degV family protein View in model
Protein product MG_326_MONOMER
Cross references GenBank: AAC71550.1, CMR: MG_326, BioCyc: MG_326, SwissProt: P47568
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 406471412359 MG_0004 MG_324 MG_326 MG_327 MG_328 MG_515 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 408971 (nt), Length: 888 (nt), Direction: Reverse, G/C content: 30.4%, Sequence:
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ATGAAGAAAACAGCTATCATCACTGATTCAACTGCTTCTATTAAACCTGG
GGAGATTAACGGCGTTTACATCTTGCCTTTACAAGTAATTGTTGATGGTG
AAAAAAGCTTTCGTGATGGGATAGAAATTGATTATGATCATGTTCATAAA
CTTCTAAAAGAAAACCCACATGGACTTAACATCTCAACTTCCTTACCACG
TCAAAGTGATCTTCTTAAGATCTTTGAAGAGATTAAAACTAAGTATGATC
GCTTTATTTTTCTGCCTTTAAGTAAAGGTTTAAGTGGTACTTATGATATG
TTGGTTCAATTAGCAAAAGAGCTTAGTGAACAAAATAAAGACAAAGAATT
TTTAGTGTTTGAAACTAGTGATATTGCTATTTCTCTAAAATGATTGGTCG
AAGATATAAAGGCATTGGTTGACAAGGGTTGTGATAATCAAACAATTAAA
GCAAAGGTTGAATCACATAAACAAAATATCCTTTCTGCAGTTACTTTAAA
AAACCTAGTGCAAATGCGTAAAGGTGGGAGAATCTCTGGTTTGAAAAAGT
TCATTACTACTTTACTAAGAGTTAAACCTATTATCTTGTTTGACAAGGGA
GTTAATACTCTAGGAGCAAAAGTTTTTAGTTTTAGTCAAGCGGTTGAGAA
GATATTTGGTTTTGTTAAAACTAAGTTTGGTGATAACTACAAAATTAAAC
GGATCGGTTTTTGCTATTCTTTTTGTAAAAATTACGCTAATGAAATTAAA
AAAATAATTACTGATTTCATTGAGCATAATAAGATTAACTTTCAAAATGA
AATTGAAAATGCTTTCATTACAAGTGTGATTATTGTTCACACTGGCATTG
ATGCTTTTTCTATTAGTTTACTTATTGACAATAAATAA
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888
 View in model
Transcription unit TU_229 View in model
Empirical formula (pH 7.5) H9465C8576N3528O6207P888
Molecular weight (pH 7.5; Da) 288772.18 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
 View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
 View in model
Half life
4.425 (min) (Show evidence)
 View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)		 9215000
pI 4.11
 
Comments
Comments molecular function of fatty-acid binding and may play a role in the cellular functions of fatty acid transport or metabolism [PUB_0110]; may have kinase activity [PUB_0154];
References

  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Chen J, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler-Bauer A, Marchler GH, Mazumder R, Nikolskaya AN, Rao BS, Panchenko AR, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. MMDB: Entrez's 3D-structure database. Nucleic Acids Res 31, 474-7 (2003). WholeCell: PUB_0110, PubMed: 12520055, URL: http://www.ncbi.nlm.nih.gov/Structure/

  3. Erni B, Siebold C, Christen S, Srinivas A, Oberholzer A, Baumann U. Small substrate, big surprise: fold, function and phylogeny of dihydroxyacetone kinases. Cell Mol Life Sci 63, 890-900 (2006). WholeCell: PUB_0154, PubMed: 16505971

  4. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  5. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319
 
Metadata
Created 2012-10-01 15:07:24
Last updated 2012-10-01 15:13:27