MG_213_214_298_6MER_ADP – Chromosome Segregation Protein SMC with SCP Proteins-ADP

Name
WID	MG_213_214_298_6MER_ADP
Name	Chromosome Segregation Protein SMC with SCP Proteins-ADP

Structure
Biosynthesis	[c]: ADP + MG_213_214_298_6MER ⇒ MG_213_214_298_6MER_ADP
No. subunits	0
DNA footprint	Length: 630 (nt), Binding: dsDNA, Region: dsDNA
Empirical formula (pH 7.5)	H₂₇₃₆₈C₁₇₀₀₈N₄₅₀₁O₅₀₉₈P₂S₇₆
Molecular weight (pH 7.5; Da)	378970.18
Extinction coefficient (260 nm, 25C, pH 7.0)	194330.00
Half life (OD (600 nm) = 0.3, M9 media, 36C; min)	1198.66

Synthesis
Formation process	Process_ChromosomeCondensation
Localization	c

Function
Reaction participant	DNA bound protein release (putative DNA integrity scanning protein releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_105_OCTAMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_105_OCTAMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (DNA polymerase core, β-clamp, and γ-complex releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) DNA_POLYMERASE_CORE_BETA_CLAMP_GAMMA_COMPLEX[c] + MG_213_214_298_6MER_ADP[d] ⇒ DNA_POLYMERASE_CORE_BETA_CLAMP_GAMMA_COMPLEX[d] + MG_213_214_298_6MER_ADP[c] Chromosome condensation [c]: ATP + H2O + MG_213_214_298_6MER ⇒ H + MG_213_214_298_6MER_ADP + PI DNA bound protein release (DNA ligase, NAD-dependent releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_254_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_254_MONOMER[d] DNA bound protein release (recombination protein, strand exchange releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_339_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_339_MONOMER[d] ... 24 more DNA bound protein release (Chromosome Segregation Protein SMC with SCP Proteins-ADP releases DnaA-ATP) MG_213_214_298_6MER_ADP[c] + MG_469_1MER_ATP[d] ⇒ MG_213_214_298_6MER_ADP[d] + MG_469_1MER_ATP[c] DNA bound protein release (heat-inducible transcription repressor HrcA, putative releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_205_DIMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_205_DIMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (3-5' helicase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_244_DIMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_244_DIMER[d] DNA bound protein release (DNA polymerase core, β-clamp, and primase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) DNA_POLYMERASE_CORE_BETA_CLAMP_PRIMASE[c] + MG_213_214_298_6MER_ADP[d] ⇒ DNA_POLYMERASE_CORE_BETA_CLAMP_PRIMASE[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (adenine-specific DNA modification methylase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_184_DIMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_184_DIMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (DNA incision complex releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_073_206_421_TETRAMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_073_206_421_TETRAMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (DNA polymerase III, beta clamp releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_001_DIMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_001_DIMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (DNA polymerase III, beta subunit releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_001_MONOMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_001_MONOMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (DNA polymerase (2) core, β-clamp, γ-complex, and primase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) DNA_POLYMERASE_2CORE_BETA_CLAMP_GAMMA_COMPLEX_PRIMASE[c] + MG_213_214_298_6MER_ADP[d] ⇒ DNA_POLYMERASE_2CORE_BETA_CLAMP_GAMMA_COMPLEX_PRIMASE[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (type I restriction modification DNA specificity domain protein releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_438_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_438_MONOMER[d] DNA bound protein release (polI-like 5'-3' exonuclease, putative releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_262_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_262_MONOMER[d] DNA bound protein release (DNA-directed RNA polymerase holoenzyme releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + RNA_POLYMERASE_HOLOENZYME[c] ⇒ MG_213_214_298_6MER_ADP[c] + RNA_POLYMERASE_HOLOENZYME[d] DNA bound protein release (replicative DNA helicase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_094_HEXAMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_094_HEXAMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (Holliday junction DNA helicase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_358_359_10MER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_358_359_10MER[d] DNA bound protein release (apurinic endonuclease releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_235_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_235_MONOMER[d] DNA bound protein release (DNA-directed RNA polymerase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + RNA_POLYMERASE[c] ⇒ MG_213_214_298_6MER_ADP[c] + RNA_POLYMERASE[d] DNA bound protein release (Holliday junction endonuclease releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_352_DIMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_352_DIMER[d] DNA bound protein release (LuxR bacterial regulatory protein, putative releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_428_DIMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_428_DIMER[d] DNA bound protein release (uracil-DNA glycosylase, putative releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_097_MONOMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_097_MONOMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (formamidopyrimidine-DNA glycosylase releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_498_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_498_MONOMER[d] DNA bound protein release (Chromosome Segregation Protein SMC with SCP Proteins-ADP releases DnaA-ADP) MG_213_214_298_6MER_ADP[c] + MG_469_1MER_ADP[d] ⇒ MG_213_214_298_6MER_ADP[d] + MG_469_1MER_ADP[c] DNA bound protein release (Spx subfamily protein releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_127_MONOMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_127_MONOMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (Uncharacterized HTH-type transcriptional regulator releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_101_MONOMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_101_MONOMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (ferric uptake repressor releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_213_214_298_6MER_ADP[d] + MG_236_MONOMER[c] ⇒ MG_213_214_298_6MER_ADP[c] + MG_236_MONOMER[d]
Complex subunit	Chromosome Segregation Protein SMC with SCP Proteins-ADP [c]: ADP + MG_213_214_298_6MER ⇒ MG_213_214_298_6MER_ADP

Parameters
Parameters	Parameter_0040: smcSepNt = 7130 nt Parameter_0041: smcSepProbCenter = 2800 nt

Metadata
Created	2012-10-01 15:07:38
Last updated	2012-10-01 15:14:08