MG_141 – transcription termination factor NusA
Name | ||
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WID | MG_141 |
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Name | transcription termination factor NusA |
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Symbol | nusA | |
Protein product | MG_141_MONOMER | |
Cross references | GenBank: AAC71359.1, CMR: MG_141, BioCyc: MG_141, SwissProt: P47387 | |
Homologs | ||
Classification | ||
Type | mRNA |
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Structure | ||
Structure |
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Sequence | Chromosome: Mgenitalium_Chr_1, Coordinate: 179151 (nt), Length: 1596 (nt), Direction: Forward, G/C content: 32.5%, Sequence: 1 51 101 151 201 251 301 351 401 451 501 551 601 651 701 751 801 851 901 951 1001 1051 1101 1151 1201 1251 1301 1351 1401 1451 1501 1551 ATGAAGATAACTTTCATTTCTGGACAAGAAGTGTCGTTAGGCACTTCTTT TTTATTGTTTTCAAAAAAAATAGTTATGAATGAATTAAACCAACCCTTAC TTGCTATTATTAAAAATGTTGCTAAAACCAAAAACCTTTCTATAGAAGAG GTGGTTTTTTGTTTGAAAACAGCTTTAGAACAAGCCTATAAAAAACACCT TAACTTTGTTAATGTTGAAGTTAACATTAACTTTGATAAGGGGATTATTA ATGTTGAACAACTCTTTAATGTTGTTAGTGATGAAAATGAAGATTATGAT GACTTTCTTGAAATCCCTTTACAAGCAGCTAACAAAATAAACAGTTCATT GCAATTAGGTGATGTGTTGCGAAAACCAATCCCCTTAAAAAACATTAGTA GTGATCTTATCAATAAGATGATTGCTATCTTTAACCAAAAGATTAGTGAA ACAAACTTTAAAGCAGTAATGAGTGAGTTTAGTAGTGAGGTTGGGGAAGT GATTGAAGCGAAAGTTGAAGATATTGATACTAACAAAGAAGGTGGTTTAA AGGGTTATATTATTAACCTTGAAACTACAAAGGGTTATATCTCCAAGCGG GAATTGTCAAAAGGGGAGCGCTTAGAGATAGGTAAAAAATACCTCTTTGT TATCAAAGAAATCCAACGGCAAGCATCGTTATGACCAATTACTTTATCAA GAAGTGATACCCGCTTACTACAGTTTTTGTTAACTTCAAATACTCCAGAA ATTGAAAATGGTACGATTGTAATCAAAAAGATTGAACGTTCCCCAGGAGT GAAATCAAAGATAGCAGTTATCTCCAATGATCCTGCAGTTGACCCAGTTG CTGCTATCTTAGGACCTAAGGGTGAGAAGATTAGGGGGATTAGTGAGGAA TTTAATGGTGAGATTATTGACATTGTCTTTTGGAATGAAGACAAGTTAAA GTTCTTAATTAATGCCATTTTACCTGCAGAAGTCATTGGTTATAACATCT TGCAGGATGATGAGCGTGATACTAGTATTGAAGTTGTTGTACCTGCAAAC CAAATTGCTAATGTTTTTGGTTTTAAAGGTGTAAACATTAGGTTAATTAG TAATTTAACAGGTTGAAATAGTGTTGATGTTTACAGTGAAAAAGATGCAA GTGAAGCCAACATTAAATTCACGAGGTTAAGCTTTGAACCTGAAGGGTTG TTTGGCATCAAAAAAAGAAGGGAAAAGATCATTAGTAATGATGCTACTGA TAAAGTCTTTTACACCTCTAAAGACAATGTGATAGATGATGAGATTATTG TTGATTTAGCTAAAGATCTAATGGTTGATAATAAACAAAAACAACCTGAG CAAGTTGCAAAGCAAGTTGTTGAAAAATCACAATTAGAAAAACAAGTTAC TCCAAAAGAAAAAGAGAAAGTTCAACCAAAAGCTAAGGTTCATTCTAATA GCCATTCCAAAAAACCAGCTAAACCTAATCAGATTTTTTCTATCACTGTT GATGCTAGTGATAAGAATCTTAAAAAAGATCAAGTTGATAATAACCAAAC AAACCCCCAAACAAAACAAACATTTGATAGCTTTGATGATCTTTAA 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 1000 1050 1100 1150 1200 1250 1300 1350 1400 1450 1500 1550 1596 |
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Transcription unit | TU_090 |
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Empirical formula (pH 7.5) | H17074C15477N6531O11062P1596 | |
Molecular weight (pH 7.5; Da) | 520995.79 |
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Functional genomics | ||
Is essential | Yes (Show evidence) |
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Relative expression | 0.369079 (dimensionless) (Show evidence) |
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Half life | 3.6 (min) (Show evidence) |
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Extinction coefficient (260 nm, 25C, pH 7.0) |
16648700 | |
pI | 3.87 | |
Comments | ||
Comments | transcription antitermination has not been reported in any mycoplasma [PUB_0182]; rho not essential in B. subtilis [PUB_0234]; the five sequenced members of the pneumoniae clade all contain most of the necessary machinery for forming an [PUB_0182]; binds RNA polymerase and promotes termination at certain RNA hairpin structures [PUB_0110]; binds Rho and RNA polymerase [PUB_0233]; helps bind Rho to elongation complex [PUB_0233]; slows RNA polymerase by enhancing pausing [PUB_0233]; | |
References |
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Metadata | ||
Created | 2012-10-01 15:07:16 | |
Last updated | 2012-10-01 15:12:59 |