MG_117

Name
WID	MG_117
Protein product	MG_117_MONOMER
Cross references	GenBank: AAC71335.1, CMR: MG_117, BioCyc: MG_117, SwissProt: P47363
Homologs	M. pneumoniae: MPN_256

Classification
Type	mRNA

Structure
Structure
Sequence	Chromosome: Mgenitalium_Chr_1, Coordinate: 143311 (nt), Length: 645 (nt), Direction: Forward, G/C content: 30.9%, Sequence: 1 51 101 151 201 251 301 351 401 451 501 551 601 ATGGATAAAAATATTTTTCAATTAGTACAAAGTTTTGCTAAAACGCAAAA TGTGCGAGCTAATTACACCTCACAAGACAAAAATATTAGTTTAGATTTTG TTAGTTTTGAAACAGTTAGTCAATCACTAACAGGTTTTCTAATTTTTAAT AATTTCAATAAATTGTTACAACTAATTGAACTGATAAAACAAAAGCAAAC ATGATTATATGTAGATCAGCTCTGAATTGTTGATCTTTCCAATAACAAAG CCTTAACTGATGCTACTGTTTGGATTATTAAACAAGAAAAATTGCCTGTT TCAGTTGCGGCTTTTAGCAACCAACAACTCAACCAAGTTTATCGCAATTC ATCCACAAGTCCTTTGTATCTTAGTTATGTCAAACCAATCGAAGTTCAAC AATTTTTTACACTTTCTCCATCCATTAACAATAATCCTTTTTTAAATCAA AATCCTTTAACTGAATCACCATTTGATAACAATAATCAGCTGTTTCAAGC AACAAAGAGCGTTGAACCTTCAATGGAAACAATGGAATTTTCCCGGTTTA TGGATGAATTTGATCAGATTACAAAGAACTTTTCTGATATAGAGCTTGAA CCTATGCAATTCACCCAAAGTTTTGATGATTGGAGCAAAGACTAG 50 100 150 200 250 300 350 400 450 500 550 600 645
Transcription unit	TU_073
Empirical formula (pH 7.5)	H₆₈₈₃C₆₂₃₇N₂₅₈₆O₄₄₉₆P₆₄₅
Molecular weight (pH 7.5; Da)	209980.84

Functional genomics
Is essential	Yes (Show evidence) Value: True Measured: Yes Species: Mycoplasma genitalium G37, Media: SP4 + 5% CO2, Temperature (C): 37.0 References Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165
Relative expression	1.29325 (dimensionless) (Show evidence) Value: 1.29325 Measured: Yes Species: Mycoplasma pneumoniae M129, Media: Hayflick media + 20% horse serum, Temperature (C): 37.0 References Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319
Half life	4.425 (min) (Show evidence) Value: 4.425 Measured: Yes Species: Escherichia coli NCM3416, Media: M9 media + 0.2% glucose, OD600 = 0.8, Temperature (C): 30.0 References Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387
Extinction coefficient (260 nm, 25C, pH 7.0)	6610600
pI	3.95

Comments
Comments	similarity to the superoxide dismutase (Mn/Fe family), C-terminal domain [PUB_0182];
References	Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387 Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165 Peterson JD, Umayam LA, Dickinson T, Hickey EK, White O. The Comprehensive Microbial Resource. Nucleic Acids Res 29, 123-5 (2001). WholeCell: PUB_0182, PubMed: 11125067, URL: http://cmr.jcvi.org/ Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

Metadata
Created	2012-10-01 15:07:15
Last updated	2012-10-01 15:12:55