MG_001_DIMER – DNA polymerase III, beta clamp

Name
WID	MG_001_DIMER
Name	DNA polymerase III, beta clamp

Structure
Biosynthesis	[c]: (2) MG_001_MONOMER ⇒ MG_001_DIMER
No. subunits	2
DNA footprint	Length: 25 (nt), Binding: ssDNA, Region: xsDNA
Empirical formula (pH 7.5)	H₆₂₇₂C₄₀₀₄N₁₀₂₀O₁₂₁₀S₁₈
Molecular weight (pH 7.5; Da)	88635.67
Extinction coefficient (260 nm, 25C, pH 7.0)	-33530.00
Half life (OD (600 nm) = 0.3, M9 media, 36C; min)	1200.00

Synthesis
Formation process	Process_Replication
Localization	c

Function
Reaction participant	DNA bound protein release (DNA polymerase III, beta clamp releases DNA gyrase) DNA_GYRASE[d] + MG_001_DIMER[c] ⇒ DNA_GYRASE[c] + MG_001_DIMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases LuxR bacterial regulatory protein, putative) MG_001_DIMER[c] + MG_428_DIMER[d] ⇒ MG_001_DIMER[d] + MG_428_DIMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases ferric uptake repressor) MG_001_DIMER[c] + MG_236_MONOMER[d] ⇒ MG_001_DIMER[d] + MG_236_MONOMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases Uncharacterized HTH-type transcriptional regulator) MG_001_DIMER[c] + MG_101_MONOMER[d] ⇒ MG_001_DIMER[d] + MG_101_MONOMER[c] DNA bound protein release (DNA incision complex releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_073_206_421_TETRAMER[c] ⇒ MG_001_DIMER[c] + MG_073_206_421_TETRAMER[d] ... 34 more DNA bound protein release (DNA polymerase III, beta clamp releases DNA-directed RNA polymerase holoenzyme) MG_001_DIMER[c] + RNA_POLYMERASE_HOLOENZYME[d] ⇒ MG_001_DIMER[d] + RNA_POLYMERASE_HOLOENZYME[c] DNA bound protein release (3-5' helicase releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_244_DIMER[c] ⇒ MG_001_DIMER[c] + MG_244_DIMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ADP) MG_001_DIMER[c] + MG_469_1MER_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_1MER_ADP[c] DNA bound protein release (DNA polymerase III, beta clamp releases heat-inducible transcription repressor HrcA, putative) MG_001_DIMER[c] + MG_205_DIMER[d] ⇒ MG_001_DIMER[d] + MG_205_DIMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA 7mer-(6)ATP-(1)ADP) MG_001_DIMER[c] + MG_469_7MER_6ATP_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_7MER_6ATP_ADP[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP 6mer) MG_001_DIMER[c] + MG_469_6MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_6MER_ATP[c] DNA bound protein release (DNA polymerase III, beta clamp releases topoisomerase IV) MG_001_DIMER[c] + MG_203_204_TETRAMER[d] ⇒ MG_001_DIMER[d] + MG_203_204_TETRAMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP 5mer) MG_001_DIMER[c] + MG_469_5MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_5MER_ATP[c] DNA bound protein release (apurinic endonuclease releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_235_MONOMER[c] ⇒ MG_001_DIMER[c] + MG_235_MONOMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases adenine-specific DNA modification methylase) MG_001_DIMER[c] + MG_184_DIMER[d] ⇒ MG_001_DIMER[d] + MG_184_DIMER[c] DNA bound protein release (Holliday junction DNA helicase releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_358_359_10MER[c] ⇒ MG_001_DIMER[c] + MG_358_359_10MER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP 4mer) MG_001_DIMER[c] + MG_469_4MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_4MER_ATP[c] DNA bound protein release (recombination protein, strand exchange releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_339_MONOMER[c] ⇒ MG_001_DIMER[c] + MG_339_MONOMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases Chromosome Segregation Protein SMC with SCP Proteins-ADP) MG_001_DIMER[c] + MG_213_214_298_6MER_ADP[d] ⇒ MG_001_DIMER[d] + MG_213_214_298_6MER_ADP[c] DNA bound protein release (Holliday junction endonuclease releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_352_DIMER[c] ⇒ MG_001_DIMER[c] + MG_352_DIMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP 7mer) MG_001_DIMER[c] + MG_469_7MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_7MER_ATP[c] DNA bound protein release (DNA polymerase III, beta clamp releases type I restriction modification DNA specificity domain protein) MG_001_DIMER[c] + MG_438_MONOMER[d] ⇒ MG_001_DIMER[d] + MG_438_MONOMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA 2mer-(1)ATP-(1)ADP) MG_001_DIMER[c] + MG_469_2MER_1ATP_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_2MER_1ATP_ADP[c] DNA bound protein release (DNA polymerase III, beta clamp releases Spx subfamily protein) MG_001_DIMER[c] + MG_127_MONOMER[d] ⇒ MG_001_DIMER[d] + MG_127_MONOMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA 4mer-(3)ATP-(1)ADP) MG_001_DIMER[c] + MG_469_4MER_3ATP_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_4MER_3ATP_ADP[c] DNA bound protein release (formamidopyrimidine-DNA glycosylase releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_498_MONOMER[c] ⇒ MG_001_DIMER[c] + MG_498_MONOMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA 6mer-(5)ATP-(1)ADP) MG_001_DIMER[c] + MG_469_6MER_5ATP_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_6MER_5ATP_ADP[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA 3mer-(2)ATP-(1)ADP) MG_001_DIMER[c] + MG_469_3MER_2ATP_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_3MER_2ATP_ADP[c] DNA bound protein release (DNA polymerase III, beta clamp releases single-strand binding protein family, octamer) MG_001_DIMER[c] + MG_091_OCTAMER[d] ⇒ MG_001_DIMER[d] + MG_091_OCTAMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP 3mer) MG_001_DIMER[c] + MG_469_3MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_3MER_ATP[c] DNA bound protein release (DNA polymerase III, beta clamp releases DNA topoisomerase I) MG_001_DIMER[c] + MG_122_MONOMER[d] ⇒ MG_001_DIMER[d] + MG_122_MONOMER[c] DNA bound protein release (DNA polymerase III, beta clamp releases DNA-directed RNA polymerase) MG_001_DIMER[c] + RNA_POLYMERASE[d] ⇒ MG_001_DIMER[d] + RNA_POLYMERASE[c] DNA bound protein release (DNA polymerase III, beta subunit releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_001_MONOMER[c] ⇒ MG_001_DIMER[c] + MG_001_MONOMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DNA ligase, NAD-dependent) MG_001_DIMER[c] + MG_254_MONOMER[d] ⇒ MG_001_DIMER[d] + MG_254_MONOMER[c] DNA bound protein release (polI-like 5'-3' exonuclease, putative releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_262_MONOMER[c] ⇒ MG_001_DIMER[c] + MG_262_MONOMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP 2mer) MG_001_DIMER[c] + MG_469_2MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_2MER_ATP[c] DNA bound protein release (uracil-DNA glycosylase, putative releases DNA polymerase III, beta clamp) MG_001_DIMER[d] + MG_097_MONOMER[c] ⇒ MG_001_DIMER[c] + MG_097_MONOMER[d] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA-ATP) MG_001_DIMER[c] + MG_469_1MER_ATP[d] ⇒ MG_001_DIMER[d] + MG_469_1MER_ATP[c] DNA bound protein release (DNA polymerase III, beta clamp releases DnaA 5mer-(4)ATP-(1)ADP) MG_001_DIMER[c] + MG_469_5MER_4ATP_ADP[d] ⇒ MG_001_DIMER[d] + MG_469_5MER_4ATP_ADP[c]
Complex subunit	DNA polymerase III, beta clamp [c]: (2) MG_001_MONOMER ⇒ MG_001_DIMER

Metadata
Created	2012-10-01 15:07:36
Last updated	2012-10-01 15:14:01