Protein degradation (ALA)
[c]: AlaAla + ATP + (2) H2O ⇒ ADP + (2) ALA + H + PI
FtsZ deactivation
[c]: H2O + MG_224_MONOMER_GTP ⇔ H + MG_224_MONOMER_GDP + PI
Ribosome assembly (RbfA)
[c]: GTP + H2O ⇒ GDP + H + PI
2',3'-cyclic-nucleotide phosphodiesterase (UMP)
[c]: H2O + U23CMP ⇒ H + U3MP
hydroxyl radical generation
gamma_radiation[e] + (2) H2O[c] ⇒ (2) H[c] + hydroxyl_radical[c] + OH[c]
... 488 more
Peptidyl-tRNA hydrolysis (SER)
[c]: AMP_SER + H2O ⇒ AMP + SER
Triacylglycerol lipase (dibutyrin) (MG_327)
[e]: DIBUTYRIN + (2) H2O ⇔ (2) BUT + GL
2-aminoethylphosphonate aminotransferase
[c]: AEPP + H2O ⇒ (2) H + NH3 + PPAA
arginine deiminase
[c]: ARG + H2O ⇔ CITR + H + NH3
3',5'-bisphosphate nucleotidase
[c]: H2O + PAP ⇒ AMP + PI
Chromosome segregation (CobQ)
[c]: GTP + H2O ⇒ GDP + H + PI
Triacylglycerol lipase (1-monobutyrin) (MG_327)
[e]: H2O + MONOBUTYRIN ⇔ BUT + GL
5'-nucleotidase (5,6-dihydro-2'-deoxythymidine monophosphate)
[c]: DHdTMP + H2O ⇒ DHdT + PI
5'-nucleotidase (2'-O-ethyl-2'-deoxycytidine monophosphate)
[c]: H2O + O2edCMP ⇒ O2edC + PI
Chromosome segregation (MraZ)
[c]: GTP + H2O ⇒ GDP + H + PI
phosphoenolpyruvate carboxylase
[c]: CO2 + H2O + PEP ⇒ H + OA + PI
oligopeptide (His) transport via ABC system
ATP[c] + H2O[c] + HisHis[e] ⇒ ADP[c] + H[c] + HisHis[c] + PI[c]
Protein degradation (THR)
[c]: ATP + (2) H2O + ThrThr ⇒ ADP + H + PI + (2) THR
5'-nucleotidase (2'-deoxycytidine monophosphate-[6,4]-2'-deoxythymidine monophosphate dewar product)
[c]: dCMP64dTMP_dewar + (2) H2O ⇒ dC64dT_dewar + (2) PI
base excision (5-hydroxyuracil)
[c]: H2O + ho5dUMP ⇒ DR5P + ho5URA
Protein polymerization (Leu)
[c]: (2) LEU ⇒ H2O + LeuLeu
alpha-L-glutamate ligase
[c]: (4) ATP + (4) GLU + (4) H2O ⇒ (4) ADP + (4) H + (4) H2O + (4) PI
5'-nucleotidase (1-methyl-2'-deoxyadenosine monophosphate)
[c]: H2O + m1dAMP ⇒ m1dA + PI
Protein degradation (ALA)
[c]: AlaAla + ATP + (2) H2O ⇒ ADP + (2) ALA + H + PI
Dipeptide import (Val-Val)
[c]: H2O + ValVal ⇒ (2) VAL
oligopeptide (Trp) transport via ABC system
ATP[c] + H2O[c] + TrpTrp[e] ⇒ ADP[c] + H[c] + PI[c] + TrpTrp[c]
Protein polymerization (His)
[c]: (2) HIS ⇒ H2O + HisHis
5'-nucleotidase (2'-deoxycytidine monophosphate-[6,4]-2'-deoxycytidine monophosphate dewar product)
[c]: dCMP64dCMP_dewar + (2) H2O ⇒ dC64dC_dewar + (2) PI
Spontaneous base deamination (cytosine ==> uracil)
[c]: CSN + H2O ⇒ NH3 + URA
5'-nucleotidase (2-hydroxy-2'-deoxyadenosine monophosphate)
[c]: H2O + oxo2dAMP ⇒ oxo2dA + PI
glycerol transport via ABC system
ATP[c] + GL[e] + H2O[c] ⇒ ADP[c] + GL[c] + H[c] + PI[c]
N-terminal methionine cleavage
[c]: H2O + MetMet ⇒ (2) MET
glycosyltransferase (Phosphatidylglycerol (dihexadec-9-enoyl, n-C16:1) ==> Diacylglycerol (n-16:1))
H2O[c] + PG161[m] ⇒ DAG161[m] + GL3P[c]
RNA cleavage (CMP)
[c]: CpCp + H2O ⇒ (2) CMP + H
5'-nucleotidase (4'-O-ethyl-2'-deoxythymidine monophosphate)
[c]: H2O + O4edTMP ⇒ O4edT + PI
5'-nucleotidase (3'-methyl-2'-deoxythymidine monophosphate)
[c]: H2O + m3dTMP ⇒ m3dT + PI
DNA radiation (gamma-ray) induced base oxidation (5,6-dihydroxyuracil; dialuric acid ==> 5-hydroxyhydantoin; hydroxyl radical)
DHURA[c] + gamma_radiation[e] + H2O[c] ⇒ CO2[c] + (2) H[c] + ho5hydantoin[c]
ribonucleoside-diphosphate reductase (ADP)
[c]: (2) ADP + MG_229_231_TETRAMER + O2 ⇒ (2) DADP + (2) H2O + MG_229_231_TETRAMER_ox
Protein degradation (CYS)
[c]: ATP + CysCys + (2) H2O ⇒ ADP + (2) CYS + H + PI
L-methionine-R-sulfoxide reductase
[c]: H2O + MET + MG_124_MONOMER_ox ⇔ METSOXRL + MG_124_MONOMER
ribonucleoside-diphosphate reductase (GDP)
[c]: (2) GDP + MG_229_231_TETRAMER + O2 ⇒ (2) DGDP + (2) H2O + MG_229_231_TETRAMER_ox
RNA cleavage (AMP)
[c]: ApAp + H2O ⇒ (2) AMP + H
Protein degradation (PHE)
[c]: ATP + (2) H2O + PhePhe ⇒ ADP + H + (2) PHE + PI
Peptidyl-tRNA hydrolysis (ILE)
[c]: AMP_ILE + H2O ⇒ AMP + ILE
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Water transport
H2O[e] ⇔ H2O[c]
5'-nucleotidase (7-ethyl-2'-deoxyguanosine monophosphate)
[c]: e7dGMP + H2O ⇒ e7dG + PI
Protein degradation (GLN)
[c]: ATP + GlnGln + (2) H2O ⇒ ADP + (2) GLN + H + PI
phosphatidylglycerol phosphate phosphatase (n-C18:1)
H2O[c] + PGP181[m] ⇒ PG181[m] + PI[c]
Peptidyl-tRNA hydrolysis (MET)
[c]: AMP_MET + H2O ⇒ AMP + MET
Triacylglycerol lipase (octadecanoate) (MG_310)
[e]: (3) H2O + TRISTEARIN ⇔ GL + (3) H + (3) OCDCA
5'-nucleotidase (8-Oxo-2'-deoxyguanosine monophosphate; 8-hydroxy-2'-deoxyguanosine monophosphate)
[c]: H2O + oxo8dGMP ⇒ oxo8dG + PI
5'-nucleotidase (2'-deoxyinosine monophosphate)
[c]: dINSMP + H2O ⇒ dINS + PI
Dipeptide import (Gly-Gly)
[c]: GlyGly + H2O ⇒ (2) GLY
drug efflux (nisin) via ABC system
ATP[c] + H2O[c] + nisin[c] ⇒ ADP[c] + H[c] + nisin[e] + PI[c]
RNA cleavage (AMP)
[c]: ApAp + H2O ⇒ (2) AMP + H
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Protein degradation (GLN)
[c]: ATP + GlnGln + (2) H2O ⇒ ADP + (2) GLN + H + PI
Triacylglycerol lipase (tripalmitin) (MG_310)
[e]: (3) H2O + TRIPALMITIN ⇔ GL + (3) H + (3) HDCA
Peptidyl-tRNA hydrolysis (HIS)
[c]: AMP_HIS + H2O ⇒ AMP + HIS
5'-nucleotidase (2'-deoxythymidine monophosphate-[6,4]-2'-deoxycytidine monophosphate dewar product)
[c]: dTMP64dCMP_dewar + (2) H2O ⇒ dT64dC_dewar + (2) PI
Protein degradation (GLU)
[c]: ATP + GluGlu + (2) H2O ⇒ ADP + (2) GLU + H + PI
Protein degradation (ILE)
[c]: ATP + (2) H2O + IleIle ⇒ ADP + H + (2) ILE + PI
peroxidase (cumene hydroperoxide)
[c]: (2) CHP + MG_427_DIMER ⇒ (2) DMBA + (2) H2O + MG_427_DIMER_ox
spermidine transport via ABC system
ATP[c] + H2O[c] + SPMD[e] ⇒ ADP[c] + H[c] + PI[c] + SPMD[c]
5'-nucleotidase (2'-deoxythymidine monophosphate-[6,4]-2'-deoxythymidine monophosphate dewar product)
[c]: dTMP64dTMP_dewar + (2) H2O ⇒ dT64dT_dewar + (2) PI
peroxidase (tert-butylhydroperoxide)
[c]: MG_454_DIMER + (2) tBHP ⇒ (2) H2O + MG_454_DIMER_ox + (2) tBOH
base excision (8-hydroxyadenine)
[c]: H2O + oxo8dAMP ⇒ DR5P + oxo8AD
Protein degradation (PRO)
[c]: ATP + (2) H2O + ProPro ⇒ ADP + H + PI + (2) PRO
Triacylglycerol lipase (tri_hdcea_in) (MG_327)
[e]: (3) H2O + TRI_HDCEA_IN ⇔ GL + (3) H + (3) HDCEA
5'-nucleotidase (2'-deoxycytidine monophosphate-[6,4]-2'-deoxycytidine monophosphate)
[c]: dCMP64dCMP + (2) H2O ⇒ dC64dC + (2) PI
Peptidyl-tRNA hydrolysis (ASN)
[c]: AMP_ASN + H2O ⇒ AMP + ASN
5'-nucleotidase (7-methyl-2'-deoxyguanosine monophosphate)
[c]: H2O + m7dGMP ⇒ m7dG + PI
Dipeptide import (Asn-Asn)
[c]: AsnAsn + H2O ⇒ (2) ASN
Chromosome segregation (Era)
[c]: GTP + H2O ⇒ GDP + H + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
sugar phosphatase (sorbitol-6-phosphate)
[c]: H2O + SBT6P ⇒ H + PI + SBT
5'-nucleotidase (N6-carbamoylmethyl-2'-deoxyadenosine monophosphate)
[c]: carbamoylmethyl6dAMP + H2O ⇒ carbamoylmethyl6dA + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
DNA internalization (dTpdTp)
(2) dTpdTp[e] + H2O[e] ⇒ (2) DTMP[e] + dTpdTp[c] + H[e]
Peptidyl-tRNA hydrolysis (ASP)
[c]: AMP_ASP + H2O ⇒ AMP + ASP
RNA cleavage (GMP)
[c]: GpGp + GTP + (2) H2O ⇒ GDP + (2) GMP + (2) H + PI
deoxyribonuclease (dTMP)
[c]: dTpdTp + H2O ⇒ (2) DTMP + H
phosphatidylglycerol phosphate phosphatase (n-C16:1)
H2O[c] + PGP161[m] ⇒ PG161[m] + PI[c]
deoxyribose 5'-phosphate lyase
[c]: dRibose5P_dRibose5P + H2O ⇒ (2) DR5P + H
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Triacylglycerol lipase (dibutyrin) (MG_344)
[e]: DIBUTYRIN + (2) H2O ⇔ (2) BUT + GL
Triacylglycerol lipase (triolein) (MG_327)
[e]: (3) H2O + TRIOLEIN ⇔ GL + (3) H + (3) OCDCEA
Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol)
[c]: GPI + H2O ⇒ GL3P + INOS
DNA base amination (5-hydroxymethyluracil ==> a-glutamylthymine; L-glutamate)
[c]: GLU + H + hm5URA ⇒ gluTHY + H2O
RNA cleavage (UMP)
[c]: H2O + UpUp ⇒ H + (2) UMP
5'-nucleotidase (UmMP)
[c]: H2O + UmMP ⇒ PI + Um
sugar phosphatase (sn-glycerol-1-phosphate)
[c]: H2O + SNGLYP ⇒ GL + PI
Protein degradation (ARG)
[c]: ArgArg + ATP + (2) H2O ⇒ ADP + (2) ARG + H + PI
5'-nucleotidase (dTMP)
[c]: DTMP + H2O ⇒ DT + PI
oxaloacetate carboxylase
[c]: ATP + CO2 + H2O + PYR ⇔ ADP + (2) H + OA + PI
Protein polymerization (Ile)
[c]: (2) ILE ⇒ H2O + IleIle
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Triacylglycerol lipase (tri_ttdcea_in) (MG_344)
[e]: (3) H2O + TRI_TTDCEA_IN ⇔ GL + H + (3) TTDCEA
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
oligopeptide (Lys) transport via ABC system
ATP[c] + H2O[c] + LysLys[e] ⇒ ADP[c] + H[c] + LysLys[c] + PI[c]
Protein degradation (MET)
[c]: ATP + (2) H2O + MetMet ⇒ ADP + H + (2) MET + PI
5'-nucleotidase (2'-O-ethyl-2'-deoxythymidine monophosphate)
[c]: H2O + O2edTMP ⇒ O2edT + PI
5'-nucleotidase (a-glutamyl-2'-deoxythymidine monophosphate)
[c]: gludTMP + H2O ⇒ gludT + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
iron (III) transporting ATPase
ATP[c] + FE3[e] + H2O[c] ⇒ ADP[c] + FE3[c] + H[c] + PI[c]
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
2',3'-cyclic-nucleotide phosphodiesterase (CMP)
[c]: C23CMP + H2O ⇒ C3MP + H
glutamine hydrolysis
[c]: GLN + H2O ⇒ GLU + H + NH3
calcium-transporting ATPase
ATP[c] + CA[e] + H2O[c] ⇒ ADP[c] + CA[c] + H[c] + PI[c]
tRNA U34 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s2UMP + SER
5'-nucleotidase (5-Carbouy-2'-deoxyuridine monophosphate)
[c]: c5dUMP + H2O ⇒ c5dU + PI
RNA cleavage (GMP)
[c]: GpGp + H2O ⇒ (2) GMP + H
5'-nucleotidase (2'-O-methyl-2'-deoxycytidine monophosphate)
[c]: H2O + O2mdCMP ⇒ O2mdC + PI
base excision (uracil)
[c]: DUMP + H2O ⇒ DR5P + URA
Spontaneous base loss (guanine)
[c]: DGMP + H2O ⇒ DR5P + GN
DNA recombination Holliday junction resolution
[c]: (2) dRibose5P_dRibose5P + (2) H2O ⇒ (4) DR5P + (2) H
Peptidyl-tRNA hydrolysis (GLN)
[c]: AMP_GLN + H2O ⇒ AMP + GLN
base excision (4,6-diamino-5-N-formamidopyrimidine)
[c]: FAPydAMP + H2O ⇒ DR5P + FAPyAD
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
adenosylhomocysteinase
[c]: AHCYS + H2O ⇒ ADN + HCYS
ribonucleoside-diphosphate reductase maintenance
[c]: (2) FMNH2 + (2) MG_124_MONOMER + MG_229_231_TETRAMER_ox ⇒ (2) FMN + (2) H2O + (2) MG_124_MONOMER_ox + MG_229_231_TETRAMER
deoxyribonuclease (dGMP)
[c]: dGpdGp + H2O ⇒ (2) DGMP + H
5'-nucleotidase (1-ethyl-2'-deoxyadenosine monophosphate)
[c]: e1dAMP + H2O ⇒ e1dA + PI
DNA cleavage (dGMP)
[c]: dGpdGp + H2O ⇒ (2) DGMP + H
DnaA inactivation
[c]: H2O + MG_469_1MER_ATP ⇒ H + MG_469_1MER_ADP + PI
5'-nucleotidase (cyclobutane 2'-deoxythymidine monophosphate dimer)
[c]: cyclobutane_dTMPdTMP + (2) H2O ⇒ cyclobutane_dTdT + (2) PI
Triacylglycerol lipase (Tween 80) (MG_327)
[e]: H2O + TWEEN80 ⇔ H + OCDCEA + POE_SORBITAN
5'-nucleotidase (3'-hydroxymethyl-2'-deoxycytidine monophosphate)
[c]: H2O + hm3dCMP ⇒ hm3dC + PI
Spontaneous base loss (cytosine)
[c]: DCMP + H2O ⇒ CSN + DR5P
5'-nucleotidase (5-hydroxy-6-hydroxy-2'-deoxythymidine monophosphate)
[c]: H2O + ho5ho6dTMP ⇒ ho5ho6dT + PI
DNA base glucosyl transfer (5-hydroxymethyluracil ==> beta-D-glucosylhydroxymethyluracil; base J; glucose)
[c]: GLC + hm5URA ⇒ glchm5URA + H2O
adenine deaminase
[c]: AD + H2O ⇒ HYXN + NH3
iron (II) transporting ATPase
ATP[c] + FE2[e] + H2O[c] ⇒ ADP[c] + FE2[c] + H[c] + PI[c]
5'-nucleotidase (5-hydroxy-6-hydroxy-2'-deoxyuridine monophosphate)
[c]: H2O + ho5ho6dUMP ⇒ ho5ho6dU + PI
5'-nucleotidase (3-ethyl-2'-deoxyguanosine monophosphate)
[c]: e3dGMP + H2O ⇒ e3dG + PI
Spontaneous base loss (adenine)
[c]: DAMP + H2O ⇒ AD + DR5P
Protein polymerization (Gln)
[c]: (2) GLN ⇒ GlnGln + H2O
oligopeptide (Cys) transport via ABC system
ATP[c] + CysCys[e] + H2O[c] ⇒ ADP[c] + CysCys[c] + H[c] + PI[c]
Spontaneous base deamination (guanine ==> xanthine)
[c]: GN + H2O ⇒ NH3 + XAN
Protein translocation (SRP)
[c]: GTP + H2O ⇒ GDP + H + PI
5'-nucleotidase (1-methyl-2'-deoxyguanosine monophosphate)
[c]: H2O + m1dGMP ⇒ m1dG + PI
5'-nucleotidase (6'-O-methyl-2'-deoxyguanosine monophosphate)
[c]: H2O + O6mdGMP ⇒ O6mdG + PI
cobalt transport via ABC system
ATP[c] + CO[e] + H2O[c] ⇒ ADP[c] + CO[c] + H[c] + PI[c]
5'-nucleotidase (5-hydroxymethyl-2'-deoxyuridine monophosphate)
[c]: H2O + hm5dUMP ⇒ hm5dU + PI
drug efflux (doxorubicin) via ABC system
ATP[c] + doxorubicin[c] + H2O[c] ⇒ ADP[c] + doxorubicin[e] + H[c] + PI[c]
Protein degradation (ILE)
[c]: ATP + (2) H2O + IleIle ⇒ ADP + H + (2) ILE + PI
Protein polymerization (Met)
[c]: (2) MET ⇒ H2O + MetMet
5'-nucleotidase (8,5'-cyclo-2'-deoxyadenosine monophosphate)
[c]: cyclodAMP + H2O ⇒ cyclodA + PI
5'-nucleotidase (m6AMP)
[c]: H2O + m6AMP ⇒ m6A + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Dipeptide import (Thr-Thr)
[c]: H2O + ThrThr ⇒ (2) THR
DNA resection (dGMP)
[c]: dGpdGp + H2O ⇒ (2) DGMP + H
Triacylglycerol lipase (trilaurin) (MG_310)
[e]: (3) H2O + TRILAURIN ⇔ (3) DDCA + GL + (3) H
5'-nucleotidase (1-ethyl-2'-deoxyguanosine monophosphate)
[c]: e1dGMP + H2O ⇒ e1dG + PI
Protein degradation (MET)
[c]: ATP + (2) H2O + MetMet ⇒ ADP + H + (2) MET + PI
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
[c]: FTHF5 + GLY + s2UMP ⇒ cmnm5s2UMP + H2O + THF
5'-nucleotidase (1,N6-etheno-2'-deoxyadenosine monophosphate)
[c]: epsilon1N6dAMP + H2O ⇒ epsilon1N6dA + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Dipeptide import (Gln-Gln)
[c]: GlnGln + H2O ⇒ (2) GLN
cytidine deaminase
[c]: CYTD + H2O ⇒ NH3 + URI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Triacylglycerol lipase (triolein) (MG_344)
[e]: (3) H2O + TRIOLEIN ⇔ GL + (3) H + (3) OCDCEA
glutamyl-tRNA (MG502) amidotransferase
[c]: ATP + GLN + GLU + H2O ⇒ ADP + GLN + GLU + H + PI
RNA cleavage (CMP)
[c]: CpCp + H2O ⇒ (2) CMP + H
5'-nucleotidase (5-formyl-2'-deoxyuridine monophosphate)
[c]: f5dUMP + H2O ⇒ f5dU + PI
purine nucleoside phosphoramidase AMP-NH2
[e]: AMP_NH2 + H2O ⇒ AMP + (2) H + NH3
Protein degradation (LYS)
[c]: ATP + (2) H2O + LysLys ⇒ ADP + H + (2) LYS + PI
Triacylglycerol lipase (tributyrin) (MG_327)
[e]: (3) H2O + TRIBUTYRIN ⇔ (3) BUT + GL
Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol)
[c]: GPI + H2O ⇒ GL3P + INOS
Protein degradation (LEU)
[c]: ATP + (2) H2O + LeuLeu ⇒ ADP + H + (2) LEU + PI
2',3'-cyclic-nucleotide phosphodiesterase (GMP)
[c]: G23CMP + H2O ⇒ G3MP + H
Peptidyl-tRNA hydrolysis (TYR)
[c]: AMP_TYR + H2O ⇒ AMP + TYR
peroxidase (tert-butylhydroperoxide)
[c]: MG_427_DIMER + (2) tBHP ⇒ (2) H2O + MG_427_DIMER_ox + (2) tBOH
5'-nucleotidase (cyclobutane 2'-deoxythymidine monophosphate 2'-deoxycytidine monophosphate)
[c]: cyclobutane_dTMPdCMP + (2) H2O ⇒ cyclobutane_dTdC + (2) PI
5'-nucleotidase (5-hydroxy-2'-deoxyuridine monophosphate)
[c]: H2O + ho5dUMP ⇒ ho5dU + PI
5'-nucleotidase (dCMP)
[c]: DCMP + H2O ⇒ DC + PI
Protein polymerization (Pro)
[c]: (2) PRO ⇒ H2O + ProPro
Protein polymerization (Cys)
[c]: (2) CYS ⇒ CysCys + H2O
Protein degradation (ASN)
[c]: AsnAsn + ATP + (2) H2O ⇒ ADP + (2) ASN + H + PI
5'-nucleotidase (beta-D-glucosylhydroxymethyl-2'-deoxyuridine monophosphate)
[c]: glchm5dUMP + H2O ⇒ glchm5dU + PI
5'-nucleotidase (5'-dihydroxypentyl-2'-deoxyuridine monophosphate)
[c]: dhpdUMP + H2O ⇒ dhpdU + PI
Protein degradation (SER)
[c]: ATP + (2) H2O + SerSer ⇒ ADP + H + PI + (2) SER
Triacylglycerol lipase (tripalmitin) (MG_310)
[e]: (3) H2O + TRIPALMITIN ⇔ GL + (3) H + (3) HDCA
Protein degradation (LYS)
[c]: ATP + (2) H2O + LysLys ⇒ ADP + H + (2) LYS + PI
Triacylglycerol lipase (tributyrin) (MG_310)
[e]: (3) H2O + TRIBUTYRIN ⇔ (3) BUT + GL
Phosphotyrosine phosphatase
[c]: H2O + pTYR ⇒ PI + TYR
5'-nucleotidase (8,5'-cyclo-2'-deoxyguanosine monophosphate)
[c]: cyclodGMP + H2O ⇒ cyclodG + PI
peroxidase (hydrogen peroxide)
[c]: (2) H2O2 + MG_427_DIMER ⇒ (4) H2O + MG_427_DIMER_ox
Protein polymerization (Val)
[c]: (2) VAL ⇒ H2O + ValVal
5'-nucleotidase (3-methyl-2'-deoxycytidine monophosphate)
[c]: H2O + m3dCMP ⇒ m3dC + PI
5'-nucleotidase (m62AMP)
[c]: H2O + m62AMP ⇒ m62A + PI
Protein polymerization (Ala)
[c]: (2) ALA ⇒ AlaAla + H2O
Protein polymerization (Arg)
[c]: (2) ARG ⇒ ArgArg + H2O
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
5'-nucleotidase (m2GMP)
[c]: H2O + m2GMP ⇒ m2G + PI
Phosphonoacetaldehyde hydrolase
[c]: H2O + PPAA ⇒ ACAL + (2) H + PI
Protein degradation (TYR)
[c]: ATP + (2) H2O + TyrTyr ⇒ ADP + H + PI + (2) TYR
Triacylglycerol lipase (dibutyrin) (MG_310)
[e]: DIBUTYRIN + (2) H2O ⇔ (2) BUT + GL
Protein polymerization (Lys)
[c]: (2) LYS ⇒ H2O + LysLys
Peptidyl-tRNA hydrolysis (ARG)
[c]: AMP_ARG + H2O ⇒ AMP + ARG + H
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)
[c]: GPG + H2O ⇒ GL + GL3P
sugar phosphatase (ribose-5-phosphate)
[c]: H2O + R5P ⇒ PI + RIB
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
RNA cleavage (GMP)
[c]: GpGp + H2O ⇒ (2) GMP + H
Triacylglycerol lipase (octadecanoate) (MG_344)
[e]: (3) H2O + TRISTEARIN ⇔ GL + (3) H + (3) OCDCA
5'-nucleotidase (8-aza-2'-deoxyadenosine monophosphate)
[c]: aza8dAMP + H2O ⇒ aza8dA + PI
Peptidyl-tRNA hydrolysis (GLU)
[c]: AMP_GLU + H2O ⇒ AMP + GLU + H
Protein polymerization (Ser)
[c]: (2) SER ⇒ H2O + SerSer
Magnesium-transporting ATPase
ATP[c] + H2O[c] + MG[e] ⇒ ADP[c] + H[c] + MG[c] + PI[c]
Dipeptide import (Ser-Ser)
[c]: H2O + SerSer ⇒ (2) SER
hydroxyl radical generation
gamma_radiation[e] + H2O[c] ⇒ hydride[c] + hydroxyl_radical[c]
5'-nucleotidase (3-methyl-2'-deoxyguanosine monophosphate)
[c]: H2O + m3dGMP ⇒ m3dG + PI
5'-nucleotidase (2'-deoxythymidine monophosphate-[6,4]-2'-deoxythymidine monophosphate)
[c]: dTMP64dTMP + (2) H2O ⇒ dT64dT + (2) PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Spontaneous abasic site strand break
[c]: dRibose5P_dRibose5P + H2O ⇒ (2) DR5P + H
nicotinic acid mononucleotide pyrophosphorylase
[c]: ATP + (3) H + H2O + NAC + PRPP ⇒ ADP + NAMN + PI + PPI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
5'-nucleotidase (m7GMP)
[c]: H2O + m7GMP ⇒ m7G + PI
purine nucleoside phosphoramidase AMP-morpholidate
[e]: AMP_Mor + H2O ⇒ AMP + (2) H + MOR
5'-nucleotidase (s4UMP)
[c]: H2O + s4UMP ⇒ PI + s4U
FtsZ ring contraction
[c]: (18) H2O + (2) MG_224_9MER_GTP ⇒ (18) H + (2) MG_224_9MER_GDP + (18) PI
DNA recombination strand exchange
[c]: ATP + H2O ⇒ ADP + H + PI
nickel transport via ABC system
ATP[c] + H2O[c] + NI[e] ⇒ ADP[c] + H[c] + NI[c] + PI[c]
5'-apurinic/apyrimidinic endonuclease
[c]: dRibose5P_dRibose5P + H2O ⇒ (2) DR5P + H
oligopeptide (Leu) transport via ABC system
ATP[c] + H2O[c] + LeuLeu[e] ⇒ ADP[c] + H[c] + LeuLeu[c] + PI[c]
Triacylglycerol lipase (Tween 80) (MG_310)
[e]: H2O + TWEEN80 ⇔ H + OCDCEA + POE_SORBITAN
Deformylation
[c]: fMetMet + H2O ⇒ FOR + H + MetMet
Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
[c]: GPE + H2O ⇒ ETN + GL3P + H
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
RNA cleavage (AMP)
[c]: ApAp + H2O ⇒ (2) AMP + H
peroxidase (hydrogen peroxide)
[c]: (2) H2O2 + MG_454_DIMER ⇒ (4) H2O + MG_454_DIMER_ox
Spontaneous base deamination (adenine ==> hypoxanthine)
[c]: AD + H2O ⇒ HYXN + NH3
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Dipeptide import (Ala-Ala)
[c]: AlaAla + H2O ⇒ (2) ALA
Protein degradation (GLU)
[c]: ATP + GluGlu + (2) H2O ⇒ ADP + (2) GLU + H + PI
5'-nucleotidase (5-Hydroxy-2'-deoxycytidine monophosphate)
[c]: H2O + ho5dCMP ⇒ ho5dC + PI
Peptidyl-tRNA hydrolysis (CYS)
[c]: AMP_CYS + H2O ⇒ AMP + CYS
Protein degradation (TRP)
[c]: ATP + (2) H2O + TrpTrp ⇒ ADP + H + PI + (2) TRP
5'-nucleotidase (s2UMP)
[c]: H2O + s2UMP ⇒ PI + s2U
Dipeptide import (Asp-Asp)
[c]: AspAsp + H2O ⇒ (2) ASP
5'-deoxyribophosphodiesterase; exonuclease
[c]: dRibose5P_dRibose5P + H2O ⇒ (2) DR5P + H
5'-nucleotidase (3-ethyl-2'-deoxyadenosine monophosphate)
[c]: e3dAMP + H2O ⇒ e3dA + PI
RNA cleavage (CMP)
[c]: CpCp + GTP + (2) H2O ⇒ (2) CMP + GDP + (2) H + PI
Protein degradation (SER)
[c]: ATP + (2) H2O + SerSer ⇒ ADP + H + PI + (2) SER
Protein polymerization (Asn)
[c]: (2) ASN ⇒ AsnAsn + H2O
5'-nucleotidase (3,N4-etheno-2'-deoxycytidine monophosphate)
[c]: epsilon3N4dCMP + H2O ⇒ epsilon3N4dC + PI
Protein polymerization (Trp)
[c]: (2) TRP ⇒ H2O + TrpTrp
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
[c]: FTHF5 + GLY + s2UMP ⇒ cmnm5s2UMP + H2O + THF
Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)
[c]: GPCH + H2O ⇒ CHOL + GL3P
Protein polymerization (Phe)
[c]: (2) PHE ⇒ H2O + PhePhe
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
DNA internalization (dApdAp)
(2) dApdAp[e] + H2O[e] ⇒ (2) DAMP[e] + dApdAp[c] + H[e]
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
[c]: FTHF5 + GLY + s2UMP ⇒ cmnm5s2UMP + H2O + THF
5'-nucleotidase (3'-ethyl-2'-deoxythymidine monophosphate)
[c]: e3dTMP + H2O ⇒ e3dT + PI
DNA cleavage (dCMP)
[c]: dCpdCp + H2O ⇒ (2) DCMP + H
EcoD DNA restriction/modification, DNA restriction
[c]: ATP + (2) dRibose5P_dRibose5P + (3) H2O ⇒ ADP + (4) DR5P + (3) H + PI
phosphoserine phosphatase
[c]: H2O + pSER ⇒ PI + SER
Protein degradation (GLY)
[c]: ATP + GlyGly + (2) H2O ⇒ ADP + (2) GLY + H + PI
formylmethionine hydrolysis
[c]: FMET + H2O ⇔ FOR + H + MET
5'-nucleotidase (4'-O-methyl-2'-deoxythymidine monophosphate)
[c]: H2O + O4mdTMP ⇒ O4mdT + PI
L-methionine-S-sulfoxide reductase
[c]: H2O + MET + MG_124_MONOMER_ox ⇔ METSOXSL + MG_124_MONOMER
Peptidyl-tRNA hydrolysis (MET)
[c]: AMP_FMET + H2O ⇒ AMP + FMET
sugar phosphatase (sn-glycerol-2-phosphate)
[c]: GL2P + H2O ⇒ GL + PI
Ribosome assembly (EngB)
[c]: GTP + H2O ⇒ GDP + H + PI
5'-nucleotidase (N6-(2-Deoxy-α,β-d-erythro-pentofuranosyl)-2,6-diamino-4-hydroxy-5-formamidopyrimidine monophosphate)
[c]: FAPydGMP + H2O ⇒ FAPydG + PI
5'-nucleotidase (2'-O-methyl-2'-deoxythymidine monophosphate)
[c]: H2O + O2mdTMP ⇒ O2mdT + PI
Protein degradation (ASN)
[c]: AsnAsn + ATP + (2) H2O ⇒ ADP + (2) ASN + H + PI
purine nucleoside phosphoramidase GMP-Lysine
[e]: GMP_Lysine + H2O ⇒ GMP + H + LYS
oligopeptide (Ser) transport via ABC system
ATP[c] + H2O[c] + SerSer[e] ⇒ ADP[c] + H[c] + PI[c] + SerSer[c]
ribonucleoside-diphosphate reductase (CDP)
[c]: (2) CDP + MG_229_231_TETRAMER + O2 ⇒ (2) DCDP + (2) H2O + MG_229_231_TETRAMER_ox
5'-nucleotidase (2'-deoxycytidine monophosphate-[6,4]-2'-deoxythymidine monophosphate)
[c]: dCMP64dTMP + (2) H2O ⇒ dC64dT + (2) PI
DNA internalization (dGpdGp)
(2) dGpdGp[e] + H2O[e] ⇒ (2) DGMP[e] + dGpdGp[c] + H[e]
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
RNA cleavage (GMP)
[c]: ATP + GpGp + (2) H2O ⇒ ADP + (2) GMP + (2) H + PI
5'-nucleotidase (2-'deoxycytidine monophosphate glycol)
[c]: dCMP_GLYC + H2O ⇒ dC_GLYC + PI
Dipeptide import (Trp-Trp)
[c]: H2O + TrpTrp ⇒ (2) TRP
5'-nucleotidase (AMP)
[c]: AMP + H2O ⇒ ADN + PI
5'-nucleotidase (4-ethyl-2'-deoxycytidine monophosphate)
[c]: e4dCMP + H2O ⇒ e4dC + PI
5'-nucleotidase (m1GMP)
[c]: H2O + m1GMP ⇒ m1G + PI
Peptidyl-tRNA hydrolysis (PHE)
[c]: AMP_PHE + H2O ⇒ AMP + PHE
5'-nucleotidase (2'-deoxy-3'-(5-hydroxy-5-methyl-hydantoin)-ribose monophosphate)
[c]: H2O + hm5hydantoin_dRiboseMP ⇒ hm5hydantoin_dRibose + PI
5'-nucleotidase (IMP)
[c]: H2O + IMP ⇒ INS + PI
tRNA U34 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s2UMP + SER
oligopeptide (Ala) transport via ABC system
AlaAla[e] + ATP[c] + H2O[c] ⇒ ADP[c] + AlaAla[c] + H[c] + PI[c]
glycosyltransferase (Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1) ==> Diacylglycerol (n-18:1))
H2O[c] + PG181[m] ⇒ DAG181[m] + GL3P[c]
Triacylglycerol lipase (trilaurin) (MG_344)
[e]: (3) H2O + TRILAURIN ⇔ (3) DDCA + GL + (3) H
methenyltetrahydrofolate cyclohydrolase
[c]: H2O + METHF ⇔ FTHF10 + H
5'-nucleotidase (1,N2-etheno-2'-deoxyguanosine monophosphate)
[c]: epsilon1N2dGMP + H2O ⇒ epsilon1N2dG + PI
DNA cleavage (dTMP)
[c]: dTpdTp + H2O ⇒ (2) DTMP + H
Triacylglycerol lipase (methyl_ocdcea) (MG_310)
[e]: H2O + METHYL_OCDCEA ⇔ CH3OH + H + OCDCEA
DNA recombination Holliday junction migration
[c]: ATP + H2O ⇒ ADP + H + PI
Protein polymerization (Gly)
[c]: (2) GLY ⇒ GlyGly + H2O
Negative supercoiling (gyrase)
[c]: (2) ATP + (2) H2O ⇒ (2) ADP + (2) H + (2) PI
RNA cleavage (UMP)
[c]: H2O + UpUp ⇒ H + (2) UMP
3'-apurinic/apyrimidinic lyase
[c]: dRibose5P_dRibose5P + H2O ⇒ (2) DR5P + H
5'-nucleotidase (8-methyl-2'-deoxyguanosine monophosphate)
[c]: H2O + m8dGMP ⇒ m8dG + PI
deoxycytidine deaminase
[c]: DC + H2O ⇒ DU + NH3
5'-nucleotidase (2'-deoxyxanthosine monophosphate)
[c]: dXANMP + H2O ⇒ dXAN + PI
Protein degradation (TYR)
[c]: ATP + (2) H2O + TyrTyr ⇒ ADP + H + PI + (2) TYR
5'-nucleotidase (3-methyl-2'-deoxyadenosine monophosphate)
[c]: H2O + m3dAMP ⇒ m3dA + PI
phosphate transport via ABC system
ATP[c] + H2O[c] + PI[e] ⇒ ADP[c] + H[c] + (2) PI[c]
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
DNA resection (dTMP)
[c]: dTpdTp + H2O ⇒ (2) DTMP + H
5'-nucleotidase (2'-deoxythymidine monophosphate glycol)
[c]: dTMP_GLYC + H2O ⇒ dT_GLYC + PI
Triacylglycerol lipase (trimyristin) (MG_344)
[e]: (3) H2O + TRIMYRISTIN ⇔ GL + (3) H + (3) TTDCA
5'-nucleotidase (cyclobutane 2'-deoxycytidine monophosphate dimer)
[c]: cyclobutane_dCMPdCMP + (2) H2O ⇒ cyclobutane_dCdC + (2) PI
Protein degradation (PRO)
[c]: ATP + (2) H2O + ProPro ⇒ ADP + H + PI + (2) PRO
5'-nucleotidase (beta-D-glucosylhydroxymethyl-2'-deoxycytidine monophosphate)
[c]: glchm5dCMP + H2O ⇒ glchm5dC + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Dipeptide import (Phe-Phe)
[c]: H2O + PhePhe ⇒ (2) PHE
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
enolase
[c]: G2P ⇔ H2O + PEP
ribonucleoside-diphosphate reductase (UDP)
[c]: MG_229_231_TETRAMER + O2 + (2) UDP ⇒ (2) DUDP + (2) H2O + MG_229_231_TETRAMER_ox
zinc-transporting ATPase
ATP[c] + H2O[c] + ZN[e] ⇒ ADP[c] + H[c] + PI[c] + ZN[c]
RNA cleavage (UMP)
[c]: H2O + UpUp ⇒ H + (2) UMP
Dipeptide import (Lys-Lys)
[c]: H2O + LysLys ⇒ (2) LYS
Triacylglycerol lipase (tri_ttdcea_in) (MG_327)
[e]: (3) H2O + TRI_TTDCEA_IN ⇔ GL + H + (3) TTDCEA
Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
[c]: GPE + H2O ⇒ ETN + GL3P + H
sugar phosphatase (mannose-6-phosphate)
[c]: H2O + MAN6P ⇒ MAN + PI
oligopeptide (Glu) transport via ABC system
ATP[c] + GluGlu[e] + H2O[c] ⇒ ADP[c] + GluGlu[c] + H[c] + PI[c]
DNA resection (dAMP)
[c]: dApdAp + H2O ⇒ (2) DAMP + H
Protein degradation (CYS)
[c]: ATP + CysCys + (2) H2O ⇒ ADP + (2) CYS + H + PI
phosphatidylglycerol phosphate phosphatase (n-C16:0)
H2O[c] + PGP160[m] ⇒ PG160[m] + PI[c]
glycosyltransferase (Phosphatidylglycerol (dihexadecanoyl, n-C16:0) ==> Diacylglycerol (n-16:0))
H2O[c] + PG160[m] ⇒ DAG160[m] + GL3P[c] + (2) H[c]
RNA cleavage (CMP)
[c]: ATP + CpCp + (2) H2O ⇒ ADP + (2) CMP + (2) H + PI
Spontaneous base loss (thymine)
[c]: DTMP + H2O ⇒ DR5P + THY
purine nucleoside phosphoramidase GMP-morpholidate
[e]: GMP_Mor + H2O ⇒ GMP + (2) H + MOR
5'-nucleotidase (8-hydroxy-2'-deoxyadenosine monophosphate)
[c]: H2O + oxo8dAMP ⇒ oxo8dA + PI
Protein degradation (ASP)
[c]: AspAsp + ATP + (2) H2O ⇒ ADP + (2) ASP + H + PI
Triacylglycerol lipase (Tween 80) (MG_344)
[e]: H2O + TWEEN80 ⇔ H + OCDCEA + POE_SORBITAN
oligopeptide (Ile) transport via ABC system
ATP[c] + H2O[c] + IleIle[e] ⇒ ADP[c] + H[c] + IleIle[c] + PI[c]
Peptidyl-tRNA hydrolysis (ALA)
[c]: AMP_ALA + H2O ⇒ ALA + AMP
DNA excision
[c]: ATP + H2O ⇒ ADP + H + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
deoxyribonuclease (dCMP)
[c]: dCpdCp + H2O ⇒ (2) DCMP + H
5'-nucleotidase (8-ethyl-2'-deoxyguanosine monophosphate)
[c]: e8dGMP + H2O ⇒ e8dG + PI
RNA cleavage (AMP)
[c]: ApAp + GTP + (2) H2O ⇒ (2) AMP + GDP + (2) H + PI
DNA radiation (gamma-ray) induced base oxidation (5-hydroxymethyluracil ==> 5-formyluracil; hydroxyl radical)
gamma_radiation[e] + hm5URA[c] + hydroxyl_radical[c] ⇒ f5URA[c] + H[c] + H2O[c]
5'-nucleotidase (2-amino-2'-deoxyadenosine monophosphate)
[c]: H2O + n2dAMP ⇒ n2dA + PI
Protein translocation (SecA)
[c]: ATP + H2O ⇒ ADP + H + PI
Protein degradation (GLY)
[c]: ATP + GlyGly + (2) H2O ⇒ ADP + (2) GLY + H + PI
ATP synthase (four protons for one ATP) (periplasm)
ADP[c] + (4) H[e] + H[c] + PI[c] ⇔ ATP[c] + (4) H[c] + H2O[c]
Dipeptide import (Leu-Leu)
[c]: H2O + LeuLeu ⇒ (2) LEU
Protein degradation (VAL)
[c]: ATP + (2) H2O + ValVal ⇒ ADP + H + PI + (2) VAL
5'-nucleotidase (cyclobutane 2'-deoxycytidine monophosphate 2'-deoxythymidine monophosphate)
[c]: cyclobutane_dCMPdTMP + (2) H2O ⇒ cyclobutane_dCdT + (2) PI
molybdate transporting ATPase
ATP[c] + H2O[c] + MOBD[e] ⇒ ADP[c] + H[c] + MOBD[c] + PI[c]
oligopeptide (Asp) transport via ABC system
AspAsp[e] + ATP[c] + H2O[c] ⇒ ADP[c] + AspAsp[c] + H[c] + PI[c]
Peptidyl-tRNA hydrolysis (PRO)
[c]: AMP_PRO + H2O ⇒ AMP + PRO
5'-nucleotidase (k2CMP)
[c]: H2O + k2CMP ⇒ k2C + PI
Triacylglycerol lipase (tri_hdcea_in) (MG_344)
[e]: (3) H2O + TRI_HDCEA_IN ⇔ GL + (3) H + (3) HDCEA
oligopeptide (Gln) transport via ABC system
ATP[c] + GlnGln[e] + H2O[c] ⇒ ADP[c] + GlnGln[c] + H[c] + PI[c]
5'-nucleotidase (2'-deoxy-3'-(5-hydroxyhydantoin)-ribose monophosphate)
[c]: H2O + ho5hydantoin_dRiboseMP ⇒ ho5hydantoin_dRibose + PI
RNA cleavage (UMP)
[c]: GTP + (2) H2O + UpUp ⇒ GDP + (2) H + PI + (2) UMP
sugar phosphatase (fructose-6-phosphate)
[c]: F6P + H2O ⇒ FRU + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
DNA base alkylation (5-hydroxymethyluracil ==> 5'-dihydroxypentyluracil; 1,2-Butylene glycol)
[c]: butylene_glycol + hm5URA ⇒ dhpURA + H2O
Protein degradation (LEU)
[c]: ATP + (2) H2O + LeuLeu ⇒ ADP + H + (2) LEU + PI
Protein degradation (HIS)
[c]: ATP + (2) H2O + HisHis ⇒ ADP + H + (2) HIS + PI
vinyl chloride activation
[c]: H2O + vinyl_chloride ⇒ chloroethylene_oxide + (2) H
5'-nucleotidase (cmnm5s2UMP)
[c]: cmnm5s2UMP + H2O ⇒ cmnm5s2U + PI
RNA cleavage (GMP)
[c]: GpGp + H2O ⇒ (2) GMP + H
Triacylglycerol lipase (1-monobutyrin) (MG_344)
[e]: H2O + MONOBUTYRIN ⇔ BUT + GL
peroxidase (cumene hydroperoxide)
[c]: (2) CHP + MG_454_DIMER ⇒ (2) DMBA + (2) H2O + MG_454_DIMER_ox
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Ribosome assembly (RbgA)
[c]: GTP + H2O ⇒ GDP + H + PI
inorganic diphosphatase
[c]: H2O + PPI ⇒ H + (2) PI
Triacylglycerol lipase (triolein) (MG_310)
[e]: (3) H2O + TRIOLEIN ⇔ GL + (3) H + (3) OCDCEA
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
sugar phosphatase (2-deoxy-glucose-6-phosphate)
[c]: deoxyG6P + H2O ⇒ deoxyGLC + (2) H + PI
Protein degradation (PHE)
[c]: ATP + (2) H2O + PhePhe ⇒ ADP + H + (2) PHE + PI
sugar phosphatase (glucose-6-phosphate)
[c]: G6P + H2O ⇒ GLC + PI
Chromosome condensation
[c]: ATP + H2O + MG_213_214_298_6MER ⇒ H + MG_213_214_298_6MER_ADP + PI
5'-nucleotidase (3-ethyl-2'-deoxycytidine monophosphate)
[c]: e3dCMP + H2O ⇒ e3dC + PI
Triacylglycerol lipase (methyl_ocdcea) (MG_344)
[e]: H2O + METHYL_OCDCEA ⇔ CH3OH + H + OCDCEA
RNA cleavage (AMP)
[c]: ApAp + ATP + (2) H2O ⇒ ADP + (2) AMP + (2) H + PI
Triacylglycerol lipase (tributyrin) (MG_344)
[e]: (3) H2O + TRIBUTYRIN ⇔ (3) BUT + GL
RNA cleavage (AMP)
[c]: ApAp + H2O ⇒ (2) AMP + H
Triacylglycerol lipase (trimyristin) (MG_327)
[e]: (3) H2O + TRIMYRISTIN ⇔ GL + (3) H + (3) TTDCA
Triacylglycerol lipase (tripalmitin) (MG_344)
[e]: (3) H2O + TRIPALMITIN ⇔ GL + (3) H + (3) HDCA
Dipeptide import (Arg-Arg)
[c]: ArgArg + H2O ⇒ (2) ARG
5'-nucleotidase (GMP)
[c]: GMP + H2O ⇒ GSN + PI
oligopeptide (Asn) transport via ABC system
AsnAsn[e] + ATP[c] + H2O[c] ⇒ ADP[c] + AsnAsn[c] + H[c] + PI[c]
5'-nucleotidase (5-methyl-2'-deoxycytidine monophosphate)
[c]: H2O + m5dCMP ⇒ m5dC + PI
deoxyribonuclease (dAMP)
[c]: dApdAp + H2O ⇒ (2) DAMP + H
Triacylglycerol lipase (trilaurin) (MG_327)
[e]: (3) H2O + TRILAURIN ⇔ (3) DDCA + GL + (3) H
oligopeptide (Tyr) transport via ABC system
ATP[c] + H2O[c] + TyrTyr[e] ⇒ ADP[c] + H[c] + PI[c] + TyrTyr[c]
Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
[c]: GPS + H2O ⇒ GL3P + SER
Triacylglycerol lipase (octadecanoate) (MG_327)
[e]: (3) H2O + TRISTEARIN ⇔ GL + (3) H + (3) OCDCA
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
Ribosome assembly (EngA)
[c]: GTP + H2O ⇒ GDP + H + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
5'-nucleotidase (GmMP)
[c]: GmMP + H2O ⇒ Gm + PI
oligopeptide (Phe) transport via ABC system
ATP[c] + H2O[c] + PhePhe[e] ⇒ ADP[c] + H[c] + PhePhe[c] + PI[c]
glycine hydroxymethyltransferase, reversible
[c]: (2) H + SER + THF ⇒ GLY + H2O + METTHF
Peptidyl-tRNA hydrolysis (LYS)
[c]: AMP_LYS + H2O ⇒ AMP + LYS
5'-nucleotidase (7-ethyl-2'-deoxyadenosine monophosphate)
[c]: e7dAMP + H2O ⇒ e7dA + PI
purine nucleoside phosphoramidase AMP-Lysine
[e]: AMP_Lysine + H2O ⇒ AMP + H + LYS
Triacylglycerol lipase (trimyristin) (MG_310)
[e]: (3) H2O + TRIMYRISTIN ⇔ GL + (3) H + (3) TTDCA
Protein degradation (THR)
[c]: ATP + (2) H2O + ThrThr ⇒ ADP + H + PI + (2) THR
5'-nucleotidase (6'-O-ethyl-2'-deoxyguanosine monophosphate)
[c]: H2O + O6edGMP ⇒ O6edG + PI
D-ribose transport via ABC system
ATP[c] + H2O[c] + RIB[e] ⇒ ADP[c] + H[c] + PI[c] + RIB[c]
Dipeptide import (Cys-Cys)
[c]: CysCys + H2O ⇒ (2) CYS
5'-nucleotidase (5-ethyl-2'-deoxycytidine monophosphate)
[c]: e5dCMP + H2O ⇒ e5dC + PI
5'-nucleotidase (dUMP)
[c]: DUMP + H2O ⇒ DU + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
5'-nucleotidase (6-methyl-2'-deoxyadenosine monophosphate)
[c]: H2O + m6dAMP ⇒ m6dA + PI
DNA unwinding
[c]: ATP + H2O ⇒ ADP + H + PI
Radiation (gamma-ray) induced strand break
dRibose5P_dRibose5P[c] + gamma_radiation[e] + H2O[c] ⇒ (2) DR5P[c] + H[c]
Dipeptide import (Glu-Glu)
[c]: GluGlu + H2O ⇒ (2) GLU
5'-nucleotidase (N2,3-etheno-2'-deoxyguanosine monophosphate)
[c]: epsilonN23dGMP + H2O ⇒ epsilonN23dG + PI
Ribosome assembly (Era)
[c]: GTP + H2O ⇒ GDP + H + PI
tRNA U34 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s2UMP + SER
Protein degradation (ARG)
[c]: ArgArg + ATP + (2) H2O ⇒ ADP + (2) ARG + H + PI
methionine adenosyltransferase
[c]: ATP + H2O + MET ⇒ AMET + PI + PPI
Protein degradation (VAL)
[c]: ATP + (2) H2O + ValVal ⇒ ADP + H + PI + (2) VAL
glycerol transport via ABC system
ATP[c] + GL3P[e] + H2O[c] ⇒ ADP[c] + GL3P[c] + H[c] + PI[c]
Protein degradation (TRP)
[c]: ATP + (2) H2O + TrpTrp ⇒ ADP + H + PI + (2) TRP
Protein polymerization (Tyr)
[c]: (2) TYR ⇒ H2O + TyrTyr
DNA incision
[c]: ATP + (2) dRibose5P_dRibose5P + (3) H2O ⇒ ADP + (4) DR5P + (3) H + PI
RNA cleavage (UMP)
[c]: H2O + UpUp ⇒ H + (2) UMP
DNA resection (dCMP)
[c]: dCpdCp + H2O ⇒ (2) DCMP + H
5'-nucleotidase (7-(2'-oxoethyl)-2'-deoxyguanosine monophosphate)
[c]: H2O + oxoethyl7dGMP ⇒ oxoethyl7dG + PI
Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
[c]: GPS + H2O ⇒ GL3P + SER
RNA cleavage (CMP)
[c]: CpCp + H2O ⇒ (2) CMP + H
Dipeptide import (Pro-Pro)
[c]: H2O + ProPro ⇒ (2) PRO
DNA base amination (5-hydroxymethyluracil ==> alpha-putrescinylthymine; putrescine)
[c]: hm5URA + PTRC ⇒ (2) H + H2O + putTHY
5'-nucleotidase (N4-(2-Deoxy-alpha,beta-D-erythro-pentofuranosyl)-4,6-diamino-5-formamidopyrimidine monophosphate)
[c]: FAPydAMP + H2O ⇒ FAPydA + PI
Triacylglycerol lipase (tri_ttdcea_in) (MG_310)
[e]: (3) H2O + TRI_TTDCEA_IN ⇔ GL + H + (3) TTDCEA
Dipeptide import (Met-Met)
[c]: H2O + MetMet ⇒ (2) MET
Spontaneous base deamination (5-methylcytosine ==> thymine)
[c]: H2O + m5CSN ⇒ NH3 + THY
RNA cleavage (UMP)
[c]: ATP + (2) H2O + UpUp ⇒ ADP + (2) H + PI + (2) UMP
RNA cleavage (CMP)
[c]: CpCp + H2O ⇒ (2) CMP + H
Protein polymerization (Thr)
[c]: (2) THR ⇒ H2O + ThrThr
Chromosome segregation (Obg)
[c]: GTP + H2O ⇒ GDP + H + PI
DNA internalization (dCpdCp)
(2) dCpdCp[e] + H2O[e] ⇒ (2) DCMP[e] + dCpdCp[c] + H[e]
Dipeptide import (His-His)
[c]: H2O + HisHis ⇒ (2) HIS
MunI DNA restriction/modification, DNA restriction
[c]: (2) dRibose5P_dRibose5P + (2) H2O ⇒ (4) DR5P + (2) H
5'-nucleotidase (5'-hydroxymethyl-2'-deoxycytidine monophosphate)
[c]: H2O + hm5dCMP ⇒ hm5dC + PI
oligopeptide (Thr) transport via ABC system
ATP[c] + H2O[c] + ThrThr[e] ⇒ ADP[c] + H[c] + PI[c] + ThrThr[c]
5'-nucleotidase (4-methyl-2'-deoxycytidine monophosphate)
[c]: H2O + m4dCMP ⇒ m4dC + PI
Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)
[c]: GPCH + H2O ⇒ CHOL + GL3P
RNA cleavage (GMP)
[c]: GpGp + H2O ⇒ (2) GMP + H
Peptidyl-tRNA hydrolysis (TRP)
[c]: AMP_TRP + H2O ⇒ AMP + TRP
5'-nucleotidase (alpha-putrescinyl-2'-deoxythymidine monophosphate)
[c]: H2O + putdTMP ⇒ PI + putdT
2',3'-cyclic-nucleotide phosphodiesterase (AMP)
[c]: A23CMP + H2O ⇒ A3MP + H
Triacylglycerol lipase (1-monobutyrin) (MG_310)
[e]: H2O + MONOBUTYRIN ⇔ BUT + GL
Dipeptide import (Ile-Ile)
[c]: H2O + IleIle ⇒ (2) ILE
Protein polymerization (Glu)
[c]: (2) GLU ⇒ GluGlu + H2O
oligopeptide (Arg) transport via ABC system
ArgArg[e] + ATP[c] + H2O[c] ⇒ ADP[c] + ArgArg[c] + H[c] + PI[c]
5'-nucleotidase (6-aza-2'-deoxythymidine monophosphate)
[c]: aza6dTMP + H2O ⇒ aza6dT + PI
phosphothreonine phosphatase
[c]: H2O + pTHR ⇒ PI + THR
Ribosome assembly (Obg)
[c]: GTP + H2O ⇒ GDP + H + PI
Protein degradation (HIS)
[c]: ATP + (2) H2O + HisHis ⇒ ADP + H + (2) HIS + PI
5'-nucleotidase (5,6-dihydroxy-2'-deoxyuridine monophosphate)
[c]: DHdUMP + H2O ⇒ DHdU + PI
Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)
[c]: GPG + H2O ⇒ GL + GL3P
Peptidyl-tRNA hydrolysis (VAL)
[c]: AMP_VAL + H2O ⇒ AMP + VAL
Triacylglycerol lipase (tri_hdcea_in) (MG_310)
[e]: (3) H2O + TRI_HDCEA_IN ⇔ GL + (3) H + (3) HDCEA
5'-nucleotidase (m5CMP)
[c]: H2O + m5CMP ⇒ m5C + PI
5'-nucleotidase (7-methyl-2'-deoxyadenosine monophosphate)
[c]: H2O + m7dAMP ⇒ m7dA + PI
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
5,10-methenyltetrahydrofolate hydrolysis
[c]: H + H2O + METHF ⇒ FTHF5
base excision (8-Oxo-guanine; 8-hydroxyguanine)
[c]: H2O + oxo8dGMP ⇒ DR5P + oxo8GN
5'-nucleotidase (6-ethyl-2'-deoxyadenosine monophosphate)
[c]: e6dAMP + H2O ⇒ e6dA + PI
5'-nucleotidase (PSIURIMP)
[c]: H2O + PSIURIMP ⇒ PI + PSIURI
copper-transporting ATPase
ATP[c] + CU[e] + H2O[c] ⇒ ADP[c] + CU[c] + H[c] + PI[c]
Negative supercoiling (topoisomerase I)
[c]: (2) ATP + (2) H2O ⇒ (2) ADP + (2) H + (2) PI
Peptidyl-tRNA hydrolysis (THR)
[c]: AMP_THR + H2O ⇒ AMP + THR
Protein degradation (ASP)
[c]: AspAsp + ATP + (2) H2O ⇒ ADP + (2) ASP + H + PI
L-glutamine transport via ABC system
ATP[c] + GLN[e] + H2O[c] ⇒ ADP[c] + GLN[c] + H[c] + PI[c]
base excision (2,6-diamino-4-hydroxy-5-formamidopyrimidine)
[c]: FAPydGMP + H2O ⇒ DR5P + FAPyGN
oligopeptide (Val) transport via ABC system
ATP[c] + H2O[c] + ValVal[e] ⇒ ADP[c] + H[c] + PI[c] + ValVal[c]
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
oligopeptide (Gly) transport via ABC system
ATP[c] + GlyGly[e] + H2O[c] ⇒ ADP[c] + GlyGly[c] + H[c] + PI[c]
putrescine transport via ABC system
ATP[c] + H2O[c] + PTRC[e] ⇒ ADP[c] + H[c] + PI[c] + PTRC[c]
Peptidyl-tRNA hydrolysis (LEU)
[c]: AMP_LEU + H2O ⇒ AMP + LEU
tRNA U8 sulfurtransferase
[c]: ATP + CYS + H2O + UMP ⇒ AMP + H + PPI + s4UMP + SER
N(6)-lipoyl-lysine hydrolysis
[c]: H2O + LIPOYLLYS ⇒ LIPOATE + LYS
5'-nucleotidase (2'-deoxythymidine monophosphate-[6,4]-2'-deoxycytidine monophosphate)
[c]: dTMP64dCMP + (2) H2O ⇒ dT64dC + (2) PI
Triacylglycerol lipase (methyl_ocdcea) (MG_327)
[e]: H2O + METHYL_OCDCEA ⇔ CH3OH + H + OCDCEA
Peptidyl-tRNA hydrolysis (GLY)
[c]: AMP_GLY + H2O ⇒ AMP + GLY
2-aminoethylphosphonate transport via ABC system
AEPP[e] + ATP[c] + H2O[c] ⇒ ADP[c] + AEPP[c] + H[c] + PI[c]
oligopeptide (Met) transport via ABC system
ATP[c] + H2O[c] + MetMet[e] ⇒ ADP[c] + H[c] + MetMet[c] + PI[c]
Dipeptide import (Tyr-Tyr)
[c]: H2O + TyrTyr ⇒ (2) TYR
DNA cleavage (dAMP)
[c]: dApdAp + H2O ⇒ (2) DAMP + H
Manganese-transporting ATPase
ATP[c] + H2O[c] + MN[e] ⇒ ADP[c] + H[c] + MN[c] + PI[c]
sulfate transporting ATPase
ATP[c] + H2O[c] + SO4[e] ⇒ ADP[c] + H[c] + PI[c] + SO4[c]
DNA base glucosyl transfer (5'-hydroxymethylcytosine ==> beta-D-glucosylhydroxymethylcytosine; glucose)
[c]: GLC + hm5CSN ⇒ glchm5CSN + H2O
oligopeptide (Pro) transport via ABC system
ATP[c] + H2O[c] + ProPro[e] ⇒ ADP[c] + H[c] + PI[c] + ProPro[c]
toxin secretion (nisin) via ABC system
ATP[c] + H2O[c] + nisin[c] ⇒ ADP[c] + H[c] + nisin[e] + PI[c]
Protein polymerization (Asp)
[c]: (2) ASP ⇒ AspAsp + H2O