DHdUMP – 5,6-dihydroxy-2'-deoxyuridine monophosphate

Name
WID DHdUMP View in model
Name 5,6-dihydroxy-2'-deoxyuridine monophosphate View in model
Traditional name [5-(5,6-dihydroxy-2,4-dioxo-3H-pyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
IUPAC name [5-(5,6-dihydroxy-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
 
Classification
Type modified_deoxyribonucleotide_monophosphate View in model
 
Structure
Empirical formula (pH 7.5) H11C9N2O10P1
SMILES (pH 7.5) OC1CC(OC1COP([O-])([O-])=O)N1C(=O)NC(=O)C(O)=C1O
Charge (pH 7.5) -2
Is hydrophobic False View in model
Molecular weight (Da) 338.16 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
246.39
logP -1.75
logD (pH 7.5) -5.14
 
Function
Reaction participant 5'-nucleotidase (5,6-dihydroxy-2'-deoxyuridine monophosphate)
[c]: DHdUMP + H2ODHdU + PI
View in model
 
Metadata
Created 2012-10-01 15:06:54
Last updated 2012-10-01 15:12:03