CMP – CMP

Name
WID	CMP
Name	CMP
Traditional name	[5-(4-amino-2-oxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphate
IUPAC name	[5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphate
Cross references	ChEBI: 17361, PubChem: 3357, CAS: 63-37-6, ThreeDMET: B01141, KEGG: C00055, ... 2 moreBioCyc: CMP, BiGG: cmp

Classification
Type	ribonucleotide_monophosphate

Structure
Empirical formula (pH 7.5)	H₁₂C₉N₃O₈P₁
SMILES (pH 7.5)	NC1=NC(=O)N(C=C1)C1OC(COP([O-])([O-])=O)C(O)C1O
Charge (pH 7.5)	-2
Is hydrophobic	False
Molecular weight (Da)	321.18
van der Waals volume (pH 7.5; Å³ molecule^‑1)	241.42
Δ_fG^'o (pH 7.5, 25C, I = 0; kJ mol^‑1)	-828.50
pI	0.910
logP	-3.30
logD (pH 7.5)	-6.28

Concentrations
Biomass composition (SP4 media, 5% CO₂, 37C; mmol gDCW^‑1)	0.0372622 [c]

Function
Reaction participant	cytidine kinase (GTP) [c]: CYTD + GTP ⇒ CMP + GDP + H tRNA(Ile)-lysidine synthetase [c]: ATP + CMP + LYS ⇒ AMP + (2) H + k2CMP + PPI RNA polymerization (CTP) [c]: CMP + CTP ⇒ CpCp + PPI RNA cleavage (CMP) [c]: CpCp + H2O ⇒ (2) CMP + H RNA cleavage (CMP) [c]: CpCp + H2O ⇒ (2) CMP + H ... 9 more RNA cleavage (CMP) [c]: ATP + CpCp + (2) H2O ⇒ ADP + (2) CMP + (2) H + PI Phosphatidylglycerol synthase (n-C16:0) CDPDG160[m] + GL3P[c] ⇔ CMP[c] + (2) H[c] + PGP160[m] Phosphatidylglycerol synthase (n-C18:1) CDPDG181[m] + GL3P[c] ⇔ CMP[c] + (2) H[c] + PGP181[m] Phosphatidylglycerol synthase (n-C16:1) CDPDG161[m] + GL3P[c] ⇔ CMP[c] + (2) H[c] + PGP161[m] RNA cleavage (CMP) [c]: CpCp + H2O ⇒ (2) CMP + H RNA cleavage (CMP) [c]: CpCp + GTP + (2) H2O ⇒ (2) CMP + GDP + (2) H + PI cytidylate kinase (CMP) [c]: ATP + CMP ⇔ ADP + CDP RNA cleavage (CMP) [c]: CpCp + H2O ⇒ (2) CMP + H DNA primer polymerization (CTP) [c]: CMP + CTP ⇒ CpCp + PPI

Metadata
Created	2012-10-01 15:06:52
Last updated	2012-10-01 15:11:58