ApAp – Ap-Ap

Name
WID	ApAp
Name	Ap-Ap
Traditional name	5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl 5-(6-aminopurin-9-yl)-4-hydroxy-2-[(phosphonatooxy)methyl]oxolan-3-yl phosphate
IUPAC name	5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl 5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-[(phosphonatooxy)methyl]oxolan-3-yl phosphate

Structure
Empirical formula (pH 7.5)	H₂₃C₂₀N₁₀O₁₃P₂
SMILES (pH 7.5)	NC1=NC=NC2=C1N=CN2C1OC(COP([O-])(=O)OC2C(COP([O-])([O-])=O)OC(C2O)N2C=NC3=C2N=CN=C3N)C(O)C1O
Charge (pH 7.5)	-3
Is hydrophobic	False
Molecular weight (Da)	673.40

Function
Reaction participant	RNA cleavage (AMP) [c]: ApAp + H2O ⇒ (2) AMP + H RNA cleavage (AMP) [c]: ApAp + H2O ⇒ (2) AMP + H RNA cleavage (AMP) [c]: ApAp + GTP + (2) H2O ⇒ (2) AMP + GDP + (2) H + PI RNA cleavage (AMP) [c]: ApAp + H2O ⇒ (2) AMP + H RNA cleavage (AMP) [c]: ApAp + H2O ⇒ (2) AMP + H ... 3 more RNA polymerization (ATP) [c]: AMP + ATP ⇒ ApAp + PPI DNA primer polymerization (ATP) [c]: AMP + ATP ⇒ ApAp + PPI RNA cleavage (AMP) [c]: ApAp + ATP + (2) H2O ⇒ ADP + (2) AMP + (2) H + PI

Metadata
Created	2012-10-01 15:06:50
Last updated	2012-10-01 15:11:55