ADN – adenosine

Name
WID	ADN
Name	adenosine
Traditional name	adenosine
IUPAC name	2-(6-amino-9H-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol
Cross references	ChEBI: 16335, PubChem: 3512, CAS: 58-61-7, BioCyc: ADENOSINE, PDBCCD: ADN, ... 4 more

Classification
Type	ribonucleoside

Structure
Empirical formula (pH 7.5)	H₁₃C₁₀N₅O₄
SMILES (pH 7.5)	C1=NC2=C(C(=N1)N)N=CN2C3C(C(C(O3)CO)O)O
Charge (pH 7.5)	0
Is hydrophobic	False
Molecular weight (Da)	267.24
van der Waals volume (pH 7.5; Å³ molecule^‑1)	215.90
Δ_fG^'o (pH 7.5, 25C, I = 0; kJ mol^‑1)	371.90
pI	8.78
logP	-2.09
logD (pH 7.5)	-2.09

Function
Reaction participant	5'-nucleotidase (AMP) [c]: AMP + H2O ⇒ ADN + PI purine-nucleoside phosphorylase (Adenosine) [c]: AD + R1P ⇔ ADN + (2) H + PI adenosylhomocysteinase [c]: AHCYS + H2O ⇒ ADN + HCYS

Comments
Comments	Media concentration set to value in Serrano et al M. pneumoniae minimal media [PUB_0614].
References	Yus E, Maier T, Michalodimitrakis K, van Noort V, Yamada T, Chen WH, Wodke JA, Güell M, Martínez S, Bourgeois R, Kühner S, Raineri E, Letunic I, Kalinina OV, Rode M, Herrmann R, Gutiérrez-Gallego R, Russell RB, Gavin AC, Bork P, Serrano L. Impact of genome reduction on bacterial metabolism and its regulation. Science 326, 1263-8 (2009). WholeCell: PUB_0614, PubMed: 19965476

Metadata
Created	2012-10-01 15:06:49
Last updated	2012-10-01 15:11:53