dhpdUMP – 5'-dihydroxypentyl-2'-deoxyuridine monophosphate

Name
WID dhpdUMP View in model
Name 5'-dihydroxypentyl-2'-deoxyuridine monophosphate View in model
Traditional name {5-[5-(4,5-dihydroxypentyl)-2,4-dioxo-3H-pyrimidin-1-yl]-3-hydroxyoxolan-2-yl}methyl phosphate
IUPAC name {5-[5-(4,5-dihydroxypentyl)-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl]-3-hydroxyoxolan-2-yl}methyl phosphate
 
Classification
Type modified_deoxyribonucleotide_monophosphate View in model
 
Structure
Empirical formula (pH 7.5) H21C14N2O10P1
SMILES (pH 7.5) [H]N1C(=O)N(C=C(CCCC(O)CO)C1=O)C1CC(O)C(COP([O-])([O-])=O)O1
Charge (pH 7.5) -2
Is hydrophobic False View in model
Molecular weight (Da) 408.30 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
331.41
logP -1.98
logD (pH 7.5) -5.33
 
Function
Reaction participant 5'-nucleotidase (5'-dihydroxypentyl-2'-deoxyuridine monophosphate)
[c]: dhpdUMP + H2OdhpdU + PI
View in model
 
Metadata
Created 2012-10-01 15:06:54
Last updated 2012-10-01 15:12:03