dTpdTp – dTp-dTp

Name
WID dTpdTp View in model
Name dTp-dTp View in model
Traditional name [3-hydroxy-5-(5-methyl-2,4-dioxo-3H-pyrimidin-1-yl)oxolan-2-yl]methyl [5-(5-methyl-2,4-dioxo-3H-pyrimidin-1-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] phosphate
IUPAC name [3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl]methyl [5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] phosphate
 
Classification
Type dideoxynucleotide View in model
 
Structure
Empirical formula (pH 7.5) H25C20N4O15P2
SMILES (pH 7.5) CC1=CN(C2CC(O)C(COP([O-])(=O)OC3CC(OC3COP([O-])([O-])=O)N3C=C(C)C(=O)NC3=O)O2)C(=O)NC1=O
Charge (pH 7.5) -3
Is hydrophobic False View in model
Molecular weight (Da) 623.38 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
476.00
logP -1.59
logD (pH 7.5) -7.32
 
Function
Reaction participant View in model
 
Metadata
Created 2012-10-01 15:06:55
Last updated 2012-10-01 15:12:05