dGpdGp – dGp-dGp

Name
WID dGpdGp View in model
Name dGp-dGp View in model
Traditional name [5-(2-amino-6-oxo-1H-purin-9-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] [5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
IUPAC name [5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] [5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
 
Classification
Type dideoxynucleotide View in model
 
Structure
Empirical formula (pH 7.5) H23C20N10O13P2
SMILES (pH 7.5) NC1=NC2=C(N=CN2C2CC(O)C(COP([O-])(=O)OC3CC(OC3COP([O-])([O-])=O)N3C=NC4=C3N=C(N)NC4=O)O2)C(=O)N1
Charge (pH 7.5) -3
Is hydrophobic False View in model
Molecular weight (Da) 673.40 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
493.52
pI 1.43
logP -4.15
logD (pH 7.5) -8.68
 
Function
Reaction participant View in model
 
Metadata
Created 2012-10-01 15:06:54
Last updated 2012-10-01 15:12:02