dCpdCp – dCp-dCp

Name
WID dCpdCp View in model
Name dCp-dCp View in model
Traditional name [5-(4-amino-2-oxopyrimidin-1-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] [5-(4-amino-2-oxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
IUPAC name [5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] [5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
 
Classification
Type dideoxynucleotide View in model
 
Structure
Empirical formula (pH 7.5) H23C18N6O13P2
SMILES (pH 7.5) NC1=NC(=O)N(C=C1)C1CC(O)C(COP([O-])(=O)OC2CC(OC2COP([O-])([O-])=O)N2C=CC(N)=NC2=O)O1
Charge (pH 7.5) -3
Is hydrophobic False View in model
Molecular weight (Da) 593.35 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
449.28
pI 1.22
logP -4.23
logD (pH 7.5) -8.87
 
Function
Reaction participant View in model
 
Metadata
Created 2012-10-01 15:06:54
Last updated 2012-10-01 15:12:01