dCMP_GLYC – 2-'deoxycytidine monophosphate glycol

Name
WID dCMP_GLYC View in model
Name 2-'deoxycytidine monophosphate glycol View in model
Traditional name [5-(4-amino-5,6-dihydroxy-2-oxo-5,6-dihydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
IUPAC name [5-(4-amino-5,6-dihydroxy-2-oxo-1,2,5,6-tetrahydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
 
Classification
Type modified_deoxyribonucleotide_monophosphate View in model
 
Structure
Empirical formula (pH 7.5) H14C9N3O9P1
SMILES (pH 7.5) NC1=NC(=O)N(C2CC(O)C(COP([O-])([O-])=O)O2)C(O)C1O
Charge (pH 7.5) -2
Is hydrophobic False View in model
Molecular weight (Da) 339.20 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
255.67
pI 1.46
logP -4.28
logD (pH 7.5) -6.81
 
Function
Reaction participant 5'-nucleotidase (2-'deoxycytidine monophosphate glycol)
[c]: dCMP_GLYC + H2OdC_GLYC + PI
View in model
 
Metadata
Created 2012-10-01 15:06:53
Last updated 2012-10-01 15:12:01