dCMP64dTMP_dewar – 2'-deoxycytidine monophosphate-[6,4]-2'-deoxythymidine monophosphate dewar product

Name
WID dCMP64dTMP_dewar View in model
Name 2'-deoxycytidine monophosphate-[6,4]-2'-deoxythymidine monophosphate dewar product View in model
Traditional name {5-[6-(5-amino-3-{4-hydroxy-5-[(phosphonatooxy)methyl]oxolan-2-yl}-5-methyl-2,6-dioxo-1,3-diazinan-4-yl)-2-oxo-1,3-diazabicyclo[2.2.0]hex-4-en-3-yl]-3-hydroxyoxolan-2-yl}methyl phosphate
IUPAC name {5-[6-(5-amino-3-{4-hydroxy-5-[(phosphonatooxy)methyl]oxolan-2-yl}-5-methyl-2,6-dioxo-1,3-diazinan-4-yl)-2-oxo-1,3-diazabicyclo[2.2.0]hex-4-en-3-yl]-3-hydroxyoxolan-2-yl}methyl phosphate
 
Classification
Type modified_deoxyribonucleotide_monophosphate View in model
 
Structure
Empirical formula (pH 7.5) H25C19N5O15P2
SMILES (pH 7.5) CC1(N)C(C2C=C3N2C(=O)N3C2CC(O)C(COP([O-])([O-])=O)O2)N(C2CC(O)C(COP([O-])([O-])=O)O2)C(=O)NC1=O
Charge (pH 7.5) -4
Is hydrophobic False View in model
Molecular weight (Da) 625.37 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
469.06
pI 1.57
logP -6.87
logD (pH 7.5) -10.14
 
Function
Reaction participant 5'-nucleotidase (2'-deoxycytidine monophosphate-[6,4]-2'-deoxythymidine monophosphate dewar product)
[c]: dCMP64dTMP_dewar + (2) H2OdC64dT_dewar + (2) PI
View in model
 
Metadata
Created 2012-10-01 15:06:54
Last updated 2012-10-01 15:12:01