dApdAp – dAp-dAp

Name
WID dApdAp View in model
Name dAp-dAp View in model
Traditional name [5-(6-aminopurin-9-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] [5-(6-aminopurin-9-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
IUPAC name [5-(6-amino-9H-purin-9-yl)-2-[(phosphonatooxy)methyl]oxolan-3-yl] [5-(6-amino-9H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
 
Classification
Type dideoxynucleotide View in model
 
Structure
Empirical formula (pH 7.5) H23C20N10O11P2
SMILES (pH 7.5) NC1=NC=NC2=C1N=CN2C1CC(O)C(COP([O-])(=O)OC2CC(OC2COP([O-])([O-])=O)N2C=NC3=C2N=CN=C3N)O1
Charge (pH 7.5) -3
Is hydrophobic False View in model
Molecular weight (Da) 641.40 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
479.41
pI 3.87
logP -7.44
logD (pH 7.5) -7.47
 
Function
Reaction participant View in model
 
Metadata
Created 2012-10-01 15:06:53
Last updated 2012-10-01 15:12:01