cyclodGMP – 8,5'-cyclo-2'-deoxyguanosine monophosphate

Name
WID cyclodGMP View in model
Name 8,5'-cyclo-2'-deoxyguanosine monophosphate View in model
Traditional name {5-amino-13-hydroxy-7-oxo-15-oxa-2,4,6,9-tetraazatetracyclo[10.2.1.0^{2,10}.0^{3,8}]pentadeca-3(8),5,9-trien-11-yl} phosphate
IUPAC name {5-amino-13-hydroxy-7-oxo-15-oxa-2,4,6,9-tetraazatetracyclo[10.2.1.0^{2,10}.0^{3,8}]pentadeca-3(8),5,9-trien-11-yl} phosphate
 
Classification
Type modified_deoxyribonucleotide_monophosphate View in model
 
Structure
Empirical formula (pH 7.5) H10C10N5O7P1
SMILES (pH 7.5) NC1=NC(=O)C2=C(N1)N1C3CC(O)C(O3)C(OP([O-])([O-])=O)C1=N2
Charge (pH 7.5) -2
Is hydrophobic False View in model
Molecular weight (Da) 343.19 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
243.94
pI 5.95
logP -1.94
logD (pH 7.5) -4.92
 
Function
Reaction participant 5'-nucleotidase (8,5'-cyclo-2'-deoxyguanosine monophosphate)
[c]: cyclodGMP + H2OcyclodG + PI
View in model
 
Metadata
Created 2012-10-01 15:06:53
Last updated 2012-10-01 15:12:00