cyclobutane_dCdC – cyclobutane 2'-deoxycytidine dimer

Name
WID	cyclobutane_dCdC
Name	cyclobutane 2'-deoxycytidine dimer
Traditional name	4,5-diamino-1,8-bis[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-4a,4b,8a,8b-tetrahydro-1,3,6,8-tetraazabiphenylene-2,7-dione
IUPAC name	4,5-diamino-1,8-bis[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2,4a,4b,7,8,8a,8b-octahydro-1,3,6,8-tetraazabiphenylene-2,7-dione

Classification
Type	modified_deoxyribonucleoside

Structure
Empirical formula (pH 7.5)	H₂₆C₁₈N₆O₈
SMILES (pH 7.5)	C1C(C(OC1N2C3C(C(=NC2=O)N)C5C3N(C4OC(C(C4)O)CO)C(N=C5N)=O)CO)O
Charge (pH 7.5)	0
Is hydrophobic	False
Molecular weight (Da)	454.43
van der Waals volume (pH 7.5; Å³ molecule^‑1)	374.23
pI	8.14
logP	-4.83
logD (pH 7.5)	-4.83

Function
Reaction participant	cyclobutane 2'-deoxycytidine dimer transport cyclobutane_dCdC[e] ⇔ cyclobutane_dCdC[c] 5'-nucleotidase (cyclobutane 2'-deoxycytidine monophosphate dimer) [c]: cyclobutane_dCMPdCMP + (2) H2O ⇒ cyclobutane_dCdC + (2) PI

Metadata
Created	2012-10-01 15:06:53
Last updated	2012-10-01 15:11:59


WholeCellKB Google