MG_419 – DNA polymerase III, subunit gamma and tau

Name
WID MG_419 View in model
Name DNA polymerase III, subunit gamma and tau View in model
Symbol dnaX
Protein product MG_419_MONOMER
Cross references GenBank: AAC71650.1, CMR: MG_419, BioCyc: MG_419, SwissProt: P47658
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 519852526646 MG_417 MG_418 MG_419 MG_421 MG_525 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 522352 (nt), Length: 1794 (nt), Direction: Reverse, G/C content: 27.0%, Sequence:
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ATGCACCAAGTTTTTTATCAAAAATATCGGCCAATCAATTTCAAACAAAC
CCTAGGACAAGAATCGATAAGAAAAATCTTGGTGAATGCTATTAACAGGG
ATAAACTACCTAATGGTTATATCTTTTCAGGTGAAAGAGGAACAGGTAAA
ACTACTTTTGCAAAGATAATAGCAAAAGCGATAAACTGCTTAAATTGAGA
TCAAATTGATGTTTGTAATAGTTGTGATGTGTGTAAAAGTATTAACACTA
ATAGTGCCATTGATATAGTTGAGATAGATGCAGCTTCTAAAAATGGTATT
AATGATATTAGAGAGTTGGTAGAAAATGTTTTCAATCATCCCTTCACATT
TAAAAAAAAGGTTTATATTTTAGATGAAGCACACATGTTAACCACCCAAT
CATGGGGTGGCTTGTTAAAAACTTTAGAAGAATCACCACCTTATGTTCTT
TTTATTTTTACAACTACTGAATTTAACAAGATTCCATTAACAATTTTGTC
CAGATGTCAAAGCTTCTTTTTTAAAAAAATAACTAGTGATTTAATCCTTG
AAAGATTAAATGATATAGCAAAAAAAGAAAAGATTAAGATAGAGAAAGAT
GCATTAATAAAAATTGCTGATTTATCCCAAGGTTCATTGCGTGATGGGCT
TAGCTTACTAGATCAAATTAGCAATTTCTCTGATAGTGAAAAAATTAGTA
TTACTGATGTTGAAAAAACATTTAATATCGTTGATAGAAATGCAAAATTT
ACTTTTATTAAAGCAGTTTTATCAGGAGATATAAAAGAAGCATTTAACTT
GCTTGATGATTTTGAAAGTAATGGTCTAAATTTCACTTACTTCTTAAGAG
AGTTGTTTGCGCTAACAGTTAATTTATATGCGTATGCAAAACTAAAAAAT
ATTAATGTTTTAGATTCAACTGAAAAAACAATGATAGAAACACTTAATTT
TGAAAAGCAGCATTATGCGTTTTTAATTAAGGCCATTGAAGAAAATACTA
ATTTTGGTTTAAGTCAATTAACTTTAATTGATAGGCTAAAAGCTATTGTT
ATTAGCTATAATGAATTTTTTAATCAAAAACCTTTAACAATAAGCTCACC
AAGTAATGAAAAATCTCTACACTTAGAAACTGAATATTTGGAAAAGAAAA
AAATAAAAAAATCAAATCACAAACAAGACCAAAAGCACTTTTCTTTATTT
GAAAAATCTTTTATAGATAAATCAGAAAAGACACCTAAAAATGATGAAGT
TACTAATAACAAATTCTTAGATACAAGCAAACTAAATCTTGCCAATATTG
CTCTTGCAATTAATGCATTTAATGACAATAAATGAATTAATCATTTTCAA
AATCTTTTAAGTGTTTTTCAAACTAAATTTAATGATAAAGATAAACAGAA
TAATTTAAGTTATTTCAATAACTTTATAGACAAATATAGTGCTCGTGATA
TAGTGAAAGCAACCAAAATAGTAAAAGCTTCTTCATTTGGGATAGTTATC
TTATTTGAAGATCAAAAAATTGCTATGAGACTTTGAAAAGAGGCAATAGA
AGAAGGTAATGTACAAGCAACTATATTTCAGATTTTTAACCAAAATTTAT
TCTTAGCATCTTTTAGTGAGCATCAATATAAAACAACAATTACTGAAGAA
ACAAAAAATCAAAAGTATCAAACTGAAGTGTTGAACTTAACCCAATTGGA
AAACTTAGCTAAGCCTTTTTTAAAAGAAAAGAAACGCTCTTTATCACAAA
AAATGGTGGATAAATACTTTAAAGGACTTTTTGAAGAAAAGTAA
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1794
View in model
Transcription unit TU_301 View in model
Empirical formula (pH 7.5) H19161C17366N7248O12397P1794
Molecular weight (pH 7.5; Da) 583322.31 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
1.29325 (dimensionless) (Show evidence)
View in model
Half life
2.5 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
18924600
pI 3.84
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:28
Last updated 2012-10-01 15:13:41