MG_394 – serine hydroxymethyltransferase

Name
WID MG_394 View in model
Name serine hydroxymethyltransferase View in model
Symbol glyA
Protein product MG_394_MONOMER
Cross references GenBank: AAC71622.1, BioCyc: MG_394, CMR: MG_394, SwissProt: P47634
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 494586500807 MG_391 MG_392 MG_393 MG_394 MG_395 MG_396 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 497086 (nt), Length: 1221 (nt), Direction: Reverse, G/C content: 34.0%, Sequence:
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ATGTTTTCAAAGGTAAGACTTTTACTTAATAAAGAGTTACAACGTCAAAG
AGAAAACATTTGTTTAATTGCTTCAGAAAATTACGTTAGCCAAGACATAT
TAGCTGTAACTGGTTCAGTATTAACAAATAAATATGCAGAAGGCTATCCC
AGTAAACGTTTTTATCAAGGCTGTGAAGTTGTTGATGAATCTGAAAACTT
AGCCATTGAAAGTTGCAAAACTTTATTTGGAGCACAATGGGCTAATGTCC
AACCTCATTCTGGATCATCTGCTAACTATGCAGTTTACTTAGCATTGTTA
AAACCAGGAGATACTATCTTAGGATTAGATCTTAATTGTGGTGGTCATTT
AACCCATGGTAGCCCCGTTAATTTTTCAGGTAAGCAATATCAAGCAGTAA
CTTATTCGTTAGATTTTGAAACAGAAACTCTTGATTATGATGCAATTCTT
CAAATTGCTCTCGAACACAAACCAAAGTTAATTATTTGTGGTTTTTCTAA
CTATTCTAGGACTGTTGACTTTAAAAAATTTAGTGCAATTGCAAAACAAG
TTAATGCGTATCTTTTAGCTGATATTGCCCATATTGCTGGTTTCATCGCT
GCAGGTTTGCACCAAAACCCTTTGCCTTTTGTGGATGTTGTCACTTCAAC
AACTCATAAAACTTTGCGTGGTCCTAGGGGGGGTATCATTATGTCTAACA
ACCAAGCAATTATCAAAAAGCTTGATAGTGGAGTATTTCCTGGATGTCAG
GGTGGACCTTTACAACATGTGATAGCAGCTAAATATGTTTGTTTTAAAGA
AGCTTTGAATCCAAAGTTTAAGCAGTATATGCAACAAGTTAAAGATAATG
CTTTAGCAATGGCAAATTGATTTTTAAAGCAGGGTTATCGTGTTGTGTCA
AAAGGTACTGAAACCCACTTATTTTCATTAGTGGTTGGTAATGGTAAAGA
TGTTGCGTTGTGGTTACAAAAAGCTAACATTGTTTTGAATATGAATACAA
TCCCTTTTGAAACAAAATCTGCTTTTAGTCCTTCAGGTATTAGACTTGGA
ACTCCTGCAATGACAACCAGAGGTTTTAAAACTAATGACTTTATTTTTGT
TGCCAGTTTGATTGATAAGGTTATTAAAAGTAATGGTAATCAAAAGGTAA
TTAGTCAAACAAAAACAGCTGTTTTAAATCTCTTAAAACGCTTTCCGCTC
TATAAGGGTTTAGCTTATTAA
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1221
View in model
Transcription unit TU_286 View in model
Empirical formula (pH 7.5) H13019C11797N4866O8568P1221
Molecular weight (pH 7.5; Da) 397870.55 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
1.29325 (dimensionless) (Show evidence)
View in model
Half life
2.6 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
12489300
pI 4.16
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:27
Last updated 2012-10-01 15:13:37