MG_385 – glycerophosphoryl diester phosphodiesterase family protein

Name
WID MG_385 View in model
Name glycerophosphoryl diester phosphodiesterase family protein View in model
Symbol ugpQ
Protein product MG_385_MONOMER
Cross references GenBank: AAC71612.1, CMR: MG_385, BioCyc: MG_385, SwissProt: P47625
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 481489487200 MG_383 MG_384 MG_385 MG_386 MG_524 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 483989 (nt), Length: 711 (nt), Direction: Reverse, G/C content: 27.7%, Sequence:
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51
101
151
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451
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651
701
ATGCGAAAACAGTTTTTAATAGCTTATCGCGGTTATAGTTCTATTGCACC
AGAAAACACCAAATTAGCATTTCAAGCAGCCCAAGTTTTTGATTTTGATG
GTATTTGAATTGATATTCAATTAACCAAAGATAAACAAATAGTAGTAACT
CATAAAGAAAACTTTAAAGTTTCTAATAAAAACTTGAATTTAAACCAAAT
TAATTTAGTTGATCTTAAAAAGGTTAACCTTGCAAGTGAATTTAAGCTTA
AGGTAACTTCACAACAAATTCAAACTTTAAAGGAAGTTTTAACGCAATTT
ATTCAGCCCTTTAAATATTTGCTGATTCATATTAAAGATGATAAAGAAAA
TAACAATTCATTATTAGAACAGTTGAATTTGCTTTGCAAAGATTTTGTCT
TAGCTAAAGAAAAAATGATTTTGTTAAGTAGTAATTTTCATATCATTAAG
TTAATAAATGAGACTTTCAAAGGCTTTAAAACCGGTTTTGTAATTGCAAA
CAAAAAAGCTTTATTAGTAGCTTCTAGAGACGAATTAATGAGATATTGCC
GTTTTTTAGTGCCAAACGAGAGTTTTTATCATAAGAACTGCAAAGAAATT
CAAAACCTGGGATTACCAGTTATTCTTTGAGTTATCAAGGGTCTTCTTCG
TTATCAATTTTATGAAAACGATCGCTTTGTGAAATTTCAAATTACTGCAC
AAATTTATTAG
50
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450
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711
View in model
Transcription unit TU_280 View in model
Empirical formula (pH 7.5) H7576C6864N2817O4956P711
Molecular weight (pH 7.5; Da) 230849.57 View in model
 
Functional genomics
Is essential
No (Show evidence)
View in model
Relative expression
1.29325 (dimensionless) (Show evidence)
View in model
Half life
4.425 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
7418500
pI 4.04
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:27
Last updated 2012-10-01 15:13:36