MG_375 – threonyl-tRNA synthetase

Name
WID MG_375 View in model
Name threonyl-tRNA synthetase View in model
Symbol thrS
Protein product MG_375_MONOMER
Cross references GenBank: AAC71602.1, CMR: MG_375, BioCyc: MG_375, SwissProt: P47615
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 470384477079 MG_372 MG_373 MG_374 MG_375 MG_377 MG_378 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 472884 (nt), Length: 1695 (nt), Direction: Reverse, G/C content: 28.4%, Sequence:
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ATGCTTGCAGGAGTTCTTTTATTACAAATATGGTTAAAATGCAAATATGC
TAATGTTCAGTTTGGTGAACATGGTTTTAATGGAGATGAATTTTATTTAG
ATTTTTATATAAATGAGAATTTTTCTACAAAACAGTTTGCAAAAATAGAA
TCTGATTTAAACTCTCTTTCTAGTAAACTAGAAGGGATTTCTCAAAAATT
TGTTTCTTTAGATGAAGCATTAAGTTTTTTTGAAAATGATCAGTTTACAA
AAAACTTATTAAAAAAAAGCAACTTAAACAAATTTAAAATCACCTTTTTT
GAAAATAAACATTTTTGAATAGAAGATTTAACTTTAACTTTTATTAAAAA
AAGTTTTATTAAGCTATTAAATGTAAGCGTAAATTATTTTTTGGGAGATC
CTTCACAATTACAACTTCAGAGGATTAATGGCATTTTTGCTCAATCAAAA
AAAGAATTAGAACAATTAATAAAAGAAAATGAAGAACGCTTGAAGAAGGA
TCACAGATCTTTAGGTAAACAATTAGAGTTATTTAGCTTTGACCCACTGA
TCGGTGCAGGTCTTCCTATTTGATTAGCAAAGGGTACAACACTAAGGAAT
ATAATCGGTAATTTTGTGCATCACCAGCAACTATTGTTTGGTTTTAATAC
TGTTTGTTCTCCTGTATTAGCTAACATAGAGCTTTTTAAAATTAGCGGCC
ACTATCAGCACTATAAGGAAGATATGTTTCCTGCTATTAAACTTGATAGT
CAAGCAATGATGCTTCGTCCTATGACATGTCCTCATCACTGTCTGATTTT
CAAACAAAAACGATATTCATATAAAAAAATGCCACAGCGCTTTTCAGAAG
ATTCTATTTTGCATCGTTTTGAAGCCTCTGGAGGATTAATAGGATTAGAA
AGAGTGAGGTGCATGACTTTACTTGATAATCACATTTTTTGTCGTGCAGA
TCAAATTAAAAGTGAGATTAAAAACGCATTTAATTTAATTCAAAAAGTTA
ATAAAAAATTTGGATTTATATTTGATAGGATAGATCTTTCTCTACATGAT
CCTAAAAATCAATCAAAATTTATTGATAATCCTGGTTTATGAAGAGAATC
TGAAAGCCAAATGGAGAATGTTTTAAAAGATTTAAATATCCAATATCAAA
AAGAGATAGGAGCTGCTGCTTTTTATGGACCAAAAATTGATTTTCAGTTC
AAAACAATCTTTAAAAAAATGATTACTATTGCCACCATTCAACTAGATTT
TTTACTACCAGAAAAATTTGATCTAACTTATATAGATAAAAAAAATACAC
TAAAAAAACCAGTTATTATCCATGTTGGAATTATTGGAACTTATGAAAGG
TTTATTGCTGCTTTACTTGAAAAAACAAGTGGTAATTTTCCTTTATGGTT
AGCACCTGTTCAAGCCGTAATTATTCCTGTTAATATCCAAAAGCATTTAA
AGGCAGCAAAAAAACTTTATAACAAATTGCTAAAAGAAAACATCCGTGTA
AATTTAGATGATAATCAAGATCGCTTAGCTAAAAAAGTTAGACAAGCAAT
CATTGAAAAAATTCCTTTACAACTTATTGTTGGAGATAAAGAAATAGAGA
ATTTAGAGAAGTTGACATGCCGTGGTTTTAAAGGTGAAAAAATCACCAGA
ATTAGCTTTAATAATTTTGTTAAAAGAGTTAGAAGAGATGGATAG
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1695
View in model
Transcription unit TU_271 View in model
Empirical formula (pH 7.5) H18077C16381N6768O11791P1695
Molecular weight (pH 7.5; Da) 550913.95 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.560583 (dimensionless) (Show evidence)
View in model
Half life
4.425 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
17741100
pI 3.99
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:26
Last updated 2012-10-01 15:13:34