MG_311 – ribosomal protein S4

Name
WID MG_311 View in model
Name ribosomal protein S4 View in model
Symbol rpsD
Protein product MG_311_MONOMER
Cross references GenBank: AAC71533.1, CMR: MG_311, BioCyc: MG_311, SwissProt: P47553
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 384776390394 MG_309 MG_310 MG_311 MG_312 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 387276 (nt), Length: 618 (nt), Direction: Reverse, G/C content: 33.0%, Sequence:
1
51
101
151
201
251
301
351
401
451
501
551
601
ATGAAATATACTGGTAGTATTTTCAAACGATCAAGACGTTTAGGTTTTTC
TTTACTTGAAAACAACAAAGAGTTTTCCAAAGGAAAAAAACGTAAATCTA
TTCCCGGTCAACATGGAAATAGGTTTCGTTCCTCAACTTTATCAGGTTAT
GCCCAACAACTCCAAGAAAAACAAAGGATGCAATACATGTATGGTATTAC
TGATAAACAATTTCGTAGGTTATTTCGCTTTGTTTTAAAACAAAAAGGTA
ACTTAACAGTTAATTTATTTAGAGTTTTAGAATCACGTTTGGATAACATA
GTTTACAGAATGGGTTTTGCACCAACAAGAAAGAGTGCAAGACAAATGGT
AAACCACGGTCATGTGATTTTAAATGATCAAACTGTTGACACCCCTTCAA
TCATCATTAATCCCGGGGATAAAGTCCGTTTAAAAGCAAGAATAACTAAA
TCCCCATTAGTTAAAAATTTTATTGAAAACAGTGTTATCTCATCATTTGT
GGAAACCAACAAAAAGGCATTTGAAGGTACTTATATAAGATTCCCAGAGC
GTAGCGAACTACCTGCTGGAATAAATGAATCTTACGTTGTTGAGTGATAC
AAGCGTTTAGTTAAATAA
50
100
150
200
250
300
350
400
450
500
550
600
618
View in model
Transcription unit TU_213 View in model
Empirical formula (pH 7.5) H6613C5994N2532O4285P618
Molecular weight (pH 7.5; Da) 201821.58 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
4.425 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
6397900
pI 3.84
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:24
Last updated 2012-10-01 15:13:25