MG_304 – metal ion (cobalt) ABC transporter, ATP-binding protein, putative

Name
WID MG_304 View in model
Name metal ion (cobalt) ABC transporter, ATP-binding protein, putative View in model
Symbol cbiO
Protein product MG_304_MONOMER
Cross references GenBank: AAC71526.1, BioCyc: MG_304, CMR: MG_304, SwissProt: P47546
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 371481377294 MG_301 MG_302 MG_303 MG_304 MG_305 MG_306 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 373981 (nt), Length: 813 (nt), Direction: Reverse, G/C content: 31.2%, Sequence:
1
51
101
151
201
251
301
351
401
451
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551
601
651
701
751
801
TTGCTACAAGTTAAAAACCTCAGTTTTAAATACCCAAAACACCAAAACAA
TGTGTTAAATCAGATTAGTTTTAATGTTCAAGATGGGTGTCATTTAGCAG
TAATAGGTCATAACGGTTCAGGTAAATCAACCCTAGTTAAACTCCTTGGC
GGATTTCTAAAAGCTAAAAAAGGAACTATCTTTTTCAATGATAAGGAGTT
GACTTCTGTTGGTTTTAATAAGATTGGAATCTTATTACAAGACCCTGATG
TGCAATTACTTGCTGATACACTCCACCAGGAATTGATTTTTACTTTGGAA
AACCATGGAGTTTTAGCTAGTGAAATGGATAAGATTATTAATGAAGTTTT
AACTGTTGTTGAATTGAAAGATAAACAATTTACACCACTTAAAAAACTTT
CATTTGGTGAAAAACAACGTGCTGTTTTTGCTTGTTTATTGGCTGTCAAA
CCACAAATTTATCTGCTTGATGAGGCATTTAGTATGCTTGATAATAAGAT
CAGCAATAAACTTAAAAAATTTGTGTTTGATACCATCAAAAAACAAAACA
AAATAGTTATCAATATTACCCATGATTTTAATGATCTGTTTCTAGCAGAT
GAGATTATCTTTTTAAGTAAAGGATCGCTAATTAAAAAGTTTGCTCCTGA
AGCGATATATGAGCAGCTTGATTTGTTTCATAACCACCACTTTAATCTCC
CTTTTCCACTTTTATTGGCCCATAAGGTGGCTAAACAAATAAACAAAAAA
ACACCAAGTTTAAGTTTTGAATTGAATGATGTAGTTAACTGGATATGCAA
ACACCTCAAATAA
50
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150
200
250
300
350
400
450
500
550
600
650
700
750
800
813
View in model
Transcription unit TU_207 View in model
Empirical formula (pH 7.5) H8674C7860N3255O5673P813
Molecular weight (pH 7.5; Da) 264684.73 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.242995 (dimensionless) (Show evidence)
View in model
Half life
0.9 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
8377500
pI 4.02
 
Comments
Comments no predicted substrate binding protein in M. genitalium; cobalt/nickel transporter [PUB_0113, PUB_0440]; associated with the cobalamin (vitamin B12) biosynthetic pathways [PUB_0110];
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Chen J, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler-Bauer A, Marchler GH, Mazumder R, Nikolskaya AN, Rao BS, Panchenko AR, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. MMDB: Entrez's 3D-structure database. Nucleic Acids Res 31, 474-7 (2003). WholeCell: PUB_0110, PubMed: 12520055, URL: http://www.ncbi.nlm.nih.gov/Structure/

  3. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  4. Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y. KEGG for linking genomes to life and the environment. Nucleic Acids Res 36, D480-4 (2008). WholeCell: PUB_0113, PubMed: 18077471, URL: http://www.genome.jp/kegg/

  5. Ren Q, Chen K, Paulsen IT. TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels. Nucleic Acids Res 35, D274-9 (2007). WholeCell: PUB_0440, PubMed: 17135193, URL: http://membranetransport.org/

  6. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:23
Last updated 2012-10-01 15:13:24