MG_289 – phosphonate ABC transporter, substrate binding protein (P37), putative

Name
WID MG_289 View in model
Name phosphonate ABC transporter, substrate binding protein (P37), putative View in model
Symbol phnD
Protein product MG_289_MONOMER
Cross references GenBank: AAC71510.1, BioCyc: MG_289, CMR: MG_289, SwissProt: Q49410
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 351524357631 MG_288 MG_289 MG_290 MG_291 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 354024 (nt), Length: 1107 (nt), Direction: Forward, G/C content: 27.9%, Sequence:
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51
101
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GTGCTTTTCAAAAAATTTACTTGGGTCATTCCAAGTTTGTTTTTAACAAT
TATTTCAACATCTTTACTTATTAGTTGTGCAACTAAAAGCGATAACACCT
TAATATTTAATATTTCACTTGATCATAACGCTGATACATCAATAGAAAAA
TTCTTTACTGTTTTTTCAAAAAAACTTAGTGGAAAATTGAATAAAAAAAT
TAATGTTAACTTTAATATAGTTGATGATTCCTTTACAAAAATTAACAATA
TTCAAGCTAATAAAGCAGATTTTGCTTTTGTTAATTCACAAGCTATTGCT
TCAAATAATTGGTTTGGCTATACGCCATTGATACAAACTTTAACAACAGC
TTTTAAAGAAGATTTGGAGCTTGATTATTATGAAGATGGTAATTTACAAA
AAAAAGCTGAAAAAACGAATTTGCTTTTTCTAAGTCCACCTTACAAAGAA
TGAGATGATATCAAACAAAAATGAACTGGAAATCGTTATGACTTTCTTTA
TGAACCTTCGAAGTTAGTTTCTTTTTACAGATCAATGATTTTAATAACTG
GTTCAGCTAGTGAAATTACAGCTATTAAAAAAGCGTGAAATGAAAAAAAC
TGAAATCAGTTTATGAAATTTGGAATTGGTCATGGACAAACAAATTCAGC
TTCACGTTTTGAGCTACCTGATCTTTTATTTAGAAAACATTTTGCTAAAA
ATTATCCCGGATTACAAAATGCAATTAATTCTGATCCCGATAAATTTGCC
GTAGTTAGAGGAAGAGAGATAGGTATAAATAAAAACATCAAGATTGTTTT
TGATGATGCTAATTCATTTTCTTGAACACAAAATATTAAAGGTTCAAAAA
GACCTTTTTACACTCCAATTGATCCTAACGATAGATTAGAAATTCTCACT
TATAGTGATCCGCTTTTGTATGACATTGGTATTGTTAGCAACAATTTATC
AAGGATATATCAAAAAGCTATTGGTGAAATTTTTATTGAGTTAGCACAAT
CAAGTGAAGATCTATATGGGCCTTCAATTGGTTATAACGGCTATAAAATG
ATTAATGATTTTGAGAAAGAAGTTGTTGAAATAATTGAAAAAACCTATGG
AAAATAA
50
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1107
View in model
Transcription unit TU_196 View in model
Empirical formula (pH 7.5) H11797C10689N4392O7714P1107
Molecular weight (pH 7.5; Da) 359497.36 View in model
 
Functional genomics
Is essential
No (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
8.0 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
11548400
pI 4.03
 
Comments
Comments phosphonates can be used in membranes, or degraded for growth, or to chelate metals;
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:23
Last updated 2012-10-01 15:13:21