MG_229 – ribonucleoside-diphosphate reductase, beta chain

Name
WID MG_229 View in model
Name ribonucleoside-diphosphate reductase, beta chain View in model
Symbol nrdF
Protein product MG_229_MONOMER
Cross references GenBank: AAC71450.1, CMR: MG_229, BioCyc: MG_229, SwissProt: P47471
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 272641278664 MG_226 MG_227 MG_228 MG_229 MG_230 MG_231 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 275141 (nt), Length: 1023 (nt), Direction: Forward, G/C content: 37.2%, Sequence:
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951
1001
ATGGCAGCTAACAATAAAAAGTACTTTTTAGAATCATTTTCCCCACTTGG
GTATGTAAAGAATAATTTTCAGGGCAACTTACGTTCTGTAAACTGGAATT
TGGTTGATGATGAGAAGGATTTGGAAGTGTGAAACAGGATTGTTCAGAAC
TTTTGGTTACCTGAAAAGATCCCTGTATCCAATGACATCCCCTCATGAAA
GAAACTCTCAAAGGATTGACAGGATCTGATCACTAAGACCTTTACTGGTT
TAACACTACTTGATACTATCCAAGCTACCATTGGTGACATCTGTCAAATT
GATCATGCTCTAACTGATCATGAGCAGGTTATTTATGCAAACTTTGCTTT
TATGGTAGGGGTACATGCCCGTTCCTATGGAACGATCTTCTCAACTTTAT
GTACATCAGAACAGATTAACGCTGCTCATGAGTGGGTTGTAAACACTGAA
AGTCTCCAGAAAAGAGCAAAGGCATTAATCCCTTACTATACGGGCAATGA
CCCGTTAAAATCAAAGGTAGCAGCAGCTTTAATGCCTGGGTTTTTACTGT
ATGGTGGGTTTTATTTGCCTTTTTACTTGTCATCAAGAAAACAACTACCA
AATACATCTGATATTATCCGCTTAATCCTTCGTGATAAAGTGATCCATAA
CTATTACAGTGGTTATAAATACCAACGTAAACTAGAAAAACTCCCTTTAG
CAAAACAAAAGGAGATGAAAGCATTTGTTTTTGAACTAATGTATCGGTTA
ATTGAACTTGAAAAGGACTATTTAAAAGAGCTTTATGAAGGGTTTGGAAT
TGTTGATGATGCCATTAAGTTCAGTGTTTACAATGCTGGTAAGTTTTTAC
AGAACTTAGGTTATGACTCCCCGTTTACTGCAGCAGAAACCAGGATTAAA
CCAGAGATTTTTGCCCAACTATCAGCACGTGCTGATGAAAACCATGACTT
TTTCTCAGGAAACGGTTCGTCGTATGTGATGGGAGTTAGTGAAGAGACAA
ATGATGATGATTGGAACTTTTAA
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1023
View in model
Transcription unit TU_151 View in model
Empirical formula (pH 7.5) H10938C9914N4167O7152P1023
Molecular weight (pH 7.5; Da) 334578.32 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
1.96428 (dimensionless) (Show evidence)
View in model
Half life
1.8 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
10410300
pI 4.01
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:20
Last updated 2012-10-01 15:13:12