MG_203 – DNA topoisomerase IV, B subunit

Name
WID MG_203 View in model
Name DNA topoisomerase IV, B subunit View in model
Symbol parE
Protein product MG_203_MONOMER
Cross references GenBank: AAC71421.1, CMR: MG_203, BioCyc: MG_203, SwissProt: P47445
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 237823244725 MG_200 MG_201 MG_202 MG_203 MG_204 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 240323 (nt), Length: 1902 (nt), Direction: Forward, G/C content: 36.5%, Sequence:
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ATGAAAAGTAACTACAGTGCAACTAACATCAAGATCTTAAAGGGTTTGGA
TGCAGTTAAAAAGCGTCCGGGGATGTACATTGGTTCTACTGATAGTAAGG
GTCTGCACCACATGCTATGGGAAATTCTTGCTAACAGTGTTGATGAAGTT
TTAGCTGGTTATGCAACCAATATTACTGTTACTTTAGATCTCAACAACAC
CATTACTGTTAGTGATGATGGCAGGGGTATTCCCTATGAGATCCACCAAG
ACAGTAACATCTCTACGATCGATACAGTTTTCACCTTTCTCCATGCAGGG
GGGAAGTTTGATGATCAGTCATACAAACTAGCAGGGGGATTACATGGGGT
TGGTGCATCAGTGGTCAATGCCTTAAGTGATCATTTAGAAGTAACAGTGA
AAAGAAATGGTCAGATCTACCAATCAGTTTATCAAGCTGGGGGTAAGATC
ATCCAAAAAGCCAAAAAGATTGGTGATACAACTAGCCATGGTACCACTGT
TAGTTTCCATGCTGACCCTAAGGTCTTTAAAAAGGCTCAATTTGATAGCA
ACATTATTAAAAGCAGGTTAAAAGAGCTAAGCTTTCTGTTTGCTAAACTA
AAGCTCACTTTTACTGATCAAAAAACTAATAAAACCACTGTTTTTTTTAG
TACCTCAGGACTAGTTCAGTTCCTTGATGAAATTAATAATACTGTAGAAA
CACTTGGCCAAAAAACACTGATTAAAGGTGAGAAGGATGGGATTGAAGTG
GAAGTGGTTTTCCAGTTTAACCAATCAGATCAAGAGACAATCTTATCATT
TGCTAACTCGATTAAAACCTTTGAAGGAGGGAGTCATGAAAATGGGTTTT
GTCTTGCCATTAGTGATGTGATCAACAGCTATTGCAGAAAGTACAACTTA
CTAAAAGAAAAAGATAAAAACTTTCAACTTAGTGAGATCAGACAAGGGTT
GAATGCTATTATCAAAGTTAACTTACCTGAAAAAAACATCGCTTTTGAAG
GACAAACTAAGAGTAAGTTGTTTTCAAAGGAAGTGAAAAACGTTGTTTAT
GAATTGGTCCAACAACACTATTTCCAGTTTCTGGAAAGAAACAACAATGA
TGCTAAATTGATCATTGATAAACTACTCAATGCTAGAAAGATTAAAGAGC
AAATCAAACAACAACGTGAGTTGAAAAAAAGTTTATCAAGTCCCCAAAAA
GAGAAGATCTTATTTGGGAAGTTAGCACCTTGTCAAACCAAAAAAACCAG
TGAAAAAGAGTTGTTTATTGTTGAAGGTGATAGTGCTGGTGGCACTGCTA
AAATGGGCCGTGATAGAATTTTTCAAGCTATCTTACCTTTGCGCGGCAAG
GTGTTAAATGTTGAAAAAATTAACAATAAGAAGGAAGCGATCACTAACGA
AGAGATCCTCACTTTAATCTTTTGTATTGGTACAGGGATTTTAACTAACT
TCAACATCAAGGACTTAAAGTACGGAAAGATCATCATTATGACTGATGCA
GATAATGATGGCGCACACATCCAAATCCTCTTACTTACCTTCTTTTATAG
GTACATGCAACCCTTAATTGAACTGGGCCATGTCTATCTAGCTCTTCCTC
CTTTATATAAACTGGAAACCAAAGATAGAAAAACAGTTAAATACCTCTGG
AGTGATTTGGAGTTGGAATCAGTCAAACTAAAGCTTAATAACTTCACTTT
ACAACGATACAAAGGACTTGGAGAGATGAATGCTGATCAGTTGTGAGATA
CTACTATGAATCCAACTACCAGAAAGCTAGTGCAAGTAAAGCTTGATGAT
CTAATTAACGCTGAAAAGCAAATCAACATCTTTATGGGTGAAAAGAGTGA
TTTGCGCAAACACTGGATTGAAGCCAACATTAACTTTAGTGTGGAAAACT
AA
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View in model
Transcription unit TU_124 View in model
Empirical formula (pH 7.5) H20391C18488N7914O13172P1902
Molecular weight (pH 7.5; Da) 623111.20 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
3.2 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
19587300
pI 3.79
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:19
Last updated 2012-10-01 15:13:08