MG_187 – Oligosaccharide or polyol ABC transporter, ATP-binding protein

Name
WID MG_187 View in model
Name Oligosaccharide or polyol ABC transporter, ATP-binding protein View in model
Protein product MG_187_MONOMER
Cross references GenBank: AAC71406.1, CMR: MG_187, BioCyc: MG_187, SwissProt: P47433
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 214261221019 MG_186 MG_187 MG_188 MG_189 MG_190 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 216761 (nt), Length: 1758 (nt), Direction: Forward, G/C content: 33.8%, Sequence:
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ATGGCTAACAATAAGAGTGCAATTGAGTTGAAAAACATCGTTGTTGATTT
TGGTGAATCAGTTGCGATTGACAACATTAACCTTAGTGTTGAAAAACACC
AACTAGTTAGCTTACTTGGTCCTAGTGGTTGTGGTAAAACCACTACACTT
GCAGTTATTGCAGGACTTATTAAACCAACTAGTGGTCAGGTGTTATTTAA
TGGTTATGATGTCACCAAAAAACCACCCCAAGAACGTAAACTAGGGCTAG
TTTTTCAAAACTATGCACTTTATCCGCACATGAATGTGTTTGAAAACATT
GTTTTCCCCCTCTACAGTGATAACTCGTGAAAACAAGCAGTTTTGGAAAA
AAACAGTGTTGCAAACCATGAGATTAACTGTTTGTTACTTACTAGCAACG
GTGCATCAGTTCAAGAGATTGATCAGCTCAATAAGTTATTTCATGATAGT
ATTGAAAAACCCAAACAGATCCAATACCAAATTAATGACCTTAATGTTAG
TGTTTTTAAAAACTTAAATGAACTAACTGCAAACCTTAAGTTAATACCAA
GTAAGCACCAGTTTGCTATTACCAATCTCAACAAACAAACTCTAAAACAG
ATTAATGAACTGGAAGCTGAGTTTAAAACAAAGTGAAAGTTACAAAAACA
AACCCCAATTAAGAGTGGGGTTGAACACAATGCCAAACTCCAAGCAATTA
AACAACACTTTAGTTATGAAAAACAACGGTTAAAAAAACACTATTTCAAA
ACTAAAGTGGAACTAAAACAAACCCTTGTTGAAAACCTTAAGTTAGTTAA
AAAAGCGATTAGTGAACAAACTAAGTTAATTAAACAGAGTAGTGATTACA
CTAAGTTAAAGCAATTAAAACGGTTAATTAAAGTTGAACCTAACCAACTC
AAAAAACAATATAAGGTTTTTCTCAATCAGTTAATTAAAAACTATTCACT
TAAAACTGATAAGTTAACTGATACTCAACTTAATGAAATTGAACAGATTA
AAACCAGAATTGTTTCAATAAAACAGTTTATCAACAAAACTGCACTTGAA
GTAGCTAACAAACTAGCGATTACCAAGATTTTAACCAAACGCCCTGATAA
GATTTCTGGTGGACAACAACAACGCGTAGCAATTGCTAGAGCAATTGTCA
GAAGACCTAAACTATTGTTAATGGATGAACCACTCTCTAACTTAGATGCA
AAGCTAAGGGTACAGACAAGACAGTGGATCAGACAGTTTCAACAGGAGTT
ACAAATTACCACTGTTTTTGTCACCCATGACCAGGAAGAAGCGATGAGTA
TTAGTGATGTCATTGTTTGTATGTCAACTGGAAAAGTGCAGCAAATCGGC
ACACCCAGTGAACTTTATTTAAAACCTGCTAATGAGTTTGTTGCGCGCTT
TTTAGGCACCCCTGAGATGAACATCATTGAATGTAGTGTCAAAAACAACC
AGTTGTTTTGAAACAACCATCTGTTAGTTACTGAGAGTTTTAAGCTTAAT
GTAGAGAAACTCTTAGTTGGGTTTAGGTATGAACAACTAGTGGTCACTAC
TAACAAAAGTAGTTTGCAAGCTAAACTAATTAACATTGAAAACTTAGGTA
AACACTTAGTTGCTACCATTAGTTTGTTTGATACCACCTTATCAATGCGC
TTAGAATTGAATAGCCACTTAAAAGTAGGTGATAGTTTAAATTTCATTAT
TAAAGCTAACAACCTCCATTTTTTTGATATTGATACAAAACAACGGATTG
AGATTTAA
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1758
View in model
Transcription unit TU_116 View in model
Empirical formula (pH 7.5) H18839C17080N7290O12143P1758
Molecular weight (pH 7.5; Da) 574972.08 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.369079 (dimensionless) (Show evidence)
View in model
Half life
2.7 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
18163700
pI 3.75
 
Comments
Comments sugar transport [PUB_0110, PUB_0439, PUB_0440]; sulfate/molybdate transport [PUB_0110];
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Chen J, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler-Bauer A, Marchler GH, Mazumder R, Nikolskaya AN, Rao BS, Panchenko AR, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. MMDB: Entrez's 3D-structure database. Nucleic Acids Res 31, 474-7 (2003). WholeCell: PUB_0110, PubMed: 12520055, URL: http://www.ncbi.nlm.nih.gov/Structure/

  3. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  4. Ren Q, Chen K, Paulsen IT. TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels. Nucleic Acids Res 35, D274-9 (2007). WholeCell: PUB_0440, PubMed: 17135193, URL: http://membranetransport.org/

  5. Saier MH Jr, Tran CV, Barabote RD. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Nucleic Acids Res 34, D181-6 (2006). WholeCell: PUB_0439, PubMed: 16381841, URL: http://www.tcdb.org/

  6. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:18
Last updated 2012-10-01 15:13:06