MG_175 – ribosomal protein S13

Name
WID MG_175 View in model
Name ribosomal protein S13 View in model
Symbol rpsM
Protein product MG_175_MONOMER
Cross references GenBank: AAC71394.1, CMR: MG_175, BioCyc: MG_175, SwissProt: P47421
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 200260205635 MG_170 MG_171 MG_172 MG_175 MG_176 MG_177 MG_178 MG_179 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 202760 (nt), Length: 375 (nt), Direction: Forward, G/C content: 39.2%, Sequence:
1
51
101
151
201
251
301
351
ATGGCACGAATCTTAGGGATTGATATCCCCAACCAAAAACGGATCGAGAT
AGCTTTAACATACATCTTTGGGATTGGTTTGTCAAGTGCAAAAACAATCT
TAAAAAAAGCAAAGATTAACCCTGATAAACGCGTTAAAGATCTGAGTGAA
GAGGAACTTGTTGCGATTAGAAACGCAGCAAGCGGTTACAAGATTGAGGG
TGATTTGAGAAGAGAGATTGCTTTAAACATCAAACACCTAACAGAGATCG
GTTCTTGAAAAGGGATTAGACACAGAAAAAACCTGCCAGTAAGAGGACAA
CGCACTAGAACCAACGCAAGAACCAGAAAAGGCCCTAGAAAAACAGTGGC
TAACAAGAAAATTGAAAGTAAGTAA
50
100
150
200
250
300
350
375
View in model
Transcription unit TU_107 View in model
Empirical formula (pH 7.5) H4051C3675N1650O2548P375
Molecular weight (pH 7.5; Da) 123715.03 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
6.3 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
3891400
pI 3.40
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:17
Last updated 2012-10-01 15:13:04