MG_168 – ribosomal protein S5

Name
WID MG_168 View in model
Name ribosomal protein S5 View in model
Symbol rpsE
Protein product MG_168_MONOMER
Cross references GenBank: AAC71386.1, BioCyc: MG_168, CMR: MG_168, SwissProt: P47414
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 196017201653 MG_162 MG_163 MG_165 MG_166 MG_167 MG_168 MG_169 MG_170 MG_171 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 198517 (nt), Length: 636 (nt), Direction: Forward, G/C content: 38.8%, Sequence:
1
51
101
151
201
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301
351
401
451
501
551
601
ATGAATGATCAAAAAACTACTAACACTGGCTTGTTAACTTCCACTCTTAA
AACCAAGCCCAAACACAACCTTAAACCTTCCAGTGAAGCCATTAAAAAAG
CAGTGTCCAAAAAGGAAGGTCATTACAAAAACAAGCGCTTTCAAAAACAT
AACTTTAATAACAAAAGTGAGTTTGAAGAGAGGATTGTCAAACTCAAACG
GATCTCCAAAACCACAAAAGGTGGGAGAAACATGCGCTTTAGTGTCCTTG
TTGTTGTTGGTAACAAAAAGGGCAAGGTTGGTTATGGGATTGCTAAGGCA
TTGGAAGTACCACTTGCCATTAAAAAAGCGATTAAAAAAGCCCATAACTC
CATTCATACAGTAGAGATCCATAAGGGTTCAATCTACCACGAAGTGATTG
GTAGAAAAGGTGCATCTAAGGTGTTGTTAAAACCTGCACCTTTAGGAACT
GGGATCATTGCTGGGGGAGCGATCCGTGCAATTGTAGAGTTAGCTGGTTT
TAGTGATATCTATACCAAGAACTTGGGAAGAAACACCCCCATTAACATGA
TCCATGCCACTATGGATGGGATCTTAAAGCAACTCTCACCCAAAAAAGTG
GCATTATTAAGAAATAAACCAATTAGTGATCTATAA
50
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350
400
450
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550
600
636
View in model
Transcription unit TU_104 View in model
Empirical formula (pH 7.5) H6842C6205N2715O4374P636
Molecular weight (pH 7.5; Da) 209131.35 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
4.8 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
6501500
pI 3.61
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:17
Last updated 2012-10-01 15:13:03