MG_166 – ribosomal protein L6

Name
WID MG_166 View in model
Name ribosomal protein L6 View in model
Symbol rplF
Protein product MG_166_MONOMER
Cross references GenBank: AAC71384.1, CMR: MG_166, BioCyc: MG_166, SwissProt: P47412
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 195109200664 MG_159 MG_161 MG_162 MG_163 MG_165 MG_166 MG_167 MG_168 MG_169 MG_170 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 197609 (nt), Length: 555 (nt), Direction: Forward, G/C content: 34.8%, Sequence:
1
51
101
151
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351
401
451
501
551
ATGTCAAAAATAGGAAATAGATCAATCAAAATTGATCCTAGTAAAGTGAG
TTTAATGCAAACAACAACACTGCTTACTATTAAAGGACCATTAGGGGAAA
ACACCATTAAACTACCCAAAAACTTACCCTTAAAGTTTGTTGTTGAAAAT
GACACTATTAAAGTAACTAATAACAACAACTTAAAACAAACTAAGATCTT
ACACGGTACTTTCAATGCGTTAGTTAACAACGCAGTTATTGGGGTTACCA
AGGGTTTTGAAAAGAAACTCATCCTAGTTGGGGTTGGTTATCGTGCTAAT
GTGGAAGGGCAATTTCTCAACTTACAATTGGGCTATTCCCATCCTATTAA
GGAGTTGATCCCAAACCAACTTACTGTTAAAGTAGAGAAGAACACTGAAA
TCACCATTAGTGGAATAAAAAAAGAGTTAGTAGGTCAGTTTGCCACTGAA
ATCAGAAAGTGAAGAAAACCTGAGCCTTATAAGGGTAAAGGGGTACTTTA
CTTTAACGAAGTAATTGTTAGAAAACAAGGTAAAACTGCAGAGGGCAAGA
AATAA
50
100
150
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250
300
350
400
450
500
550
555
View in model
Transcription unit TU_104 View in model
Empirical formula (pH 7.5) H5962C5406N2343O3812P555
Molecular weight (pH 7.5; Da) 181936.81 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.560583 (dimensionless) (Show evidence)
View in model
Half life
3.4 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
5768000
pI 3.64
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:17
Last updated 2012-10-01 15:13:02