MG_165 – ribosomal protein S8

Name
WID MG_165 View in model
Name ribosomal protein S8 View in model
Symbol rpsH
Protein product MG_165_MONOMER
Cross references GenBank: AAC71383.1, CMR: MG_165, BioCyc: MG_165, SwissProt: P47411
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 194677200103 MG_159 MG_161 MG_162 MG_163 MG_165 MG_166 MG_167 MG_168 MG_169 MG_170 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 197177 (nt), Length: 426 (nt), Direction: Forward, G/C content: 33.8%, Sequence:
1
51
101
151
201
251
301
351
401
ATGATAATCAATAAAGTTCCCAAAGCCCATTTTGATCCAGTTTCTGATCT
TTTCACTAAGATCAACAATGCTAGAAAAGCTAAGCTTTTAACTGTTACCA
CCATCGCTTCTAAGTTAAAGATAGCTATCTTAGAGATTTTGATTAAAGAG
GGCTATTTAGCTAACTATCAGGTGTTGGAAAATAAAACTAAAACCAAAAA
ACTAGTTAGTTTCACATTAAAATACACCCAAAGAAGGATATGTTCTATTA
ATGGGGTGAAACAGATCTCAAAACCAGGATTAAGAATCTATCGTTCCTTT
GAAAAACTTCCCCTTGTTTTAAATGGTCTTGGTATTGCAATTATCTCCAC
TAGTGATGGAGTGATGACTGATAAAGTAGCAAGGTTAAAGAAGATTGGTG
GGGAGATTTTAGCTTACGTTTGGTAA
50
100
150
200
250
300
350
400
426
View in model
Transcription unit TU_104 View in model
Empirical formula (pH 7.5) H4554C4127N1731O2967P426
Molecular weight (pH 7.5; Da) 139068.79 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
3.0 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
4380000
pI 3.94
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:17
Last updated 2012-10-01 15:13:02