MG_152 – ribosomal protein L4/L1 family

Name
WID MG_152 View in model
Name ribosomal protein L4/L1 family View in model
Symbol rplD
Protein product MG_152_MONOMER
Cross references GenBank: AAC71370.1, CMR: MG_152, BioCyc: MG_152, SwissProt: P47398
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 188643194279 MG_149 MG_150 MG_151 MG_152 MG_153 MG_154 MG_156 MG_157 MG_478 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 191143 (nt), Length: 636 (nt), Direction: Forward, G/C content: 36.8%, Sequence:
1
51
101
151
201
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301
351
401
451
501
551
601
ATGGCTAAACTTAAAGTAATCCAGTTTGATGGTAGTTTTAAAGGTGAGAT
CCAACCTGCTAACCACCTCCTTTTAAAAAAAGCAGTGATCCAACCAGTGT
TTGATGCTATCTTATTAGAACAAGCAGCATGTAGACAAGGCACTCACTCT
ACTTTAACTAAGGGTGAAGTTAGTGGTGGGGGTAAAAAACCATATAAACA
AAAGCACACTGGTAAAGCTAGACAGGGTTCAATAAGAAACCCCCATTATG
TGGGGGGTGGTGTTGTTTTTGGTCCTAAACCCAACCGTAACTACAAACTA
AAACTAAACAAAAAGGCTTATCAACTTGCTTTAACTAGTGCCTTTGCACA
AAAGCTTAACAACAACCAAGTGATAGTTGCTGAAGCCAAGTTGTTTGAAC
AAACCAATGCCAAAACTAAAAAGATGCTGACGTTTCTCAAGAATGCCAAA
CTAACTGAGCAAAAACTCTTGTTTGTGATTGATACTATCTCAAAACCACT
GTTGTTGAGTACTAACAACCTAAAGCAGATAGTAGTCAAACAGTTTAATA
AAGTATCAGTAAGAGATCTACTTTTAGCTAAAACTATCATCATTGAAAAA
GCTGCTTTTACAAAACTGGAGGAACGACTTAAATAG
50
100
150
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250
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350
400
450
500
550
600
636
View in model
Transcription unit TU_101 View in model
Empirical formula (pH 7.5) H6830C6193N2679O4385P636
Molecular weight (pH 7.5; Da) 208646.88 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.369079 (dimensionless) (Show evidence)
View in model
Half life
6.0 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
6501600
pI 3.68
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:16
Last updated 2012-10-01 15:13:00