MG_145 – riboflavin biosynthesis protein RibF

Name
WID MG_145 View in model
Name riboflavin biosynthesis protein RibF View in model
Symbol ribF
Protein product MG_145_MONOMER
Cross references GenBank: AAC71363.1, CMR: MG_145, BioCyc: MG_145, SwissProt: P47391
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 181553187363 MG_142 MG_143 MG_144 MG_145 MG_146 MG_147 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 184053 (nt), Length: 810 (nt), Direction: Forward, G/C content: 30.5%, Sequence:
1
51
101
151
201
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451
501
551
601
651
701
751
801
ATGAAATCACTCTTTATTGGTTATTTTGATGGATTACATCAAGGTCATCT
ATTTTTAAAGCAGAACAGTAAGTTTGAACCAATGGTGTTATTAATTGATA
ACCCACCTTTAAAACAAACCAACTGGCTTTATGATTTACAACAACGGGTT
GCACAAATAAAAACTTACTTGAAAGCAACTGTAGAAGTATTTGATGTTGC
CAAACATAACATGAATGCACTTAGTTTTTTTGAACAACAGATTAAAAGAT
TGAATTGTGATGAAATTATTGTTGGTACAGATTGGCATTTTGGTAATGAT
CATAAGGATGGGATCTGGTTAAAGAAACTGTTTAAAAATACTGTTATTGT
TAATAAAACAAACCTATCAAGTAGTGTTATCCGTAACTATCTAACTAATA
ATGAACTTGAAAAAGCTAACCAACTTTTAGTGGAACCTTATTATAGAGTG
GGCACAGTAGTACATGGTTTAAAAAAGGCAAGGTTGCTTGGTTTTCCAAC
TGCTAACATTGTTATGGATAACCACTTATTGACTTTAAATAAGGGGAGTT
ATATAGTAAGAGTTTTATTAAATAACCAAACTTTTTATGGGATTGGTTTT
ATTAGCCAAAAGGATCAGGATTTGGTGTGTGAAACCCATATCTTTAACTT
TAATAATGAGATTTATGGTTCACTGGTCAAATTTACACTGTTAAAGTTCA
TTAGAACAATTAGTAAGTTTTCCAGTCAAGCAGCTTTGCAAAAAGCAATT
CAAAGTGATGCTAACTTTGCTTTAAAGTGGTTGGAAAACCAAAATTTAGA
TAAAATTTAA
50
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750
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810
View in model
Transcription unit TU_093 View in model
Empirical formula (pH 7.5) H8639C7828N3234O5652P810
Molecular weight (pH 7.5; Da) 263542.06 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.560583 (dimensionless) (Show evidence)
View in model
Half life
4.425 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
8425800
pI 4.06
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:16
Last updated 2012-10-01 15:12:59