MG_100 – glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit

Name
WID MG_100 View in model
Name glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit View in model
Symbol gatB
Protein product MG_100_MONOMER
Cross references GenBank: AAC71318.1, CMR: MG_100, BioCyc: MG_100, SwissProt: P47346
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 124779131213 MG_098 MG_099 MG_100 MG_101 MG_102 MG_103 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 127279 (nt), Length: 1434 (nt), Direction: Forward, G/C content: 31.7%, Sequence:
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1401
ATGATTAATTTTGAAGCGATTATTGGAATTGAAGTCCATGTAGTTTTAAA
TACTGCTAGCAAGATGTTTTCAAAAGCACCTAACCGCGTTGATAATCAAA
AAATCAATCATTTTATTGACCCAATAGATTTAGGTTTACCAGGCACTTTG
CCTCAAGTTAATGAGTTAGCAGTTTACAAGGCATTATTATTAGCTGATGC
ATTAAAAATGAAGACAGTAACAAATAAACTTGTTTTTGATCGAAAGCACT
ATTTTTATCAGGACTTACCTAAGGGTTTTCAAATCACCCAACAAAATTAT
CCTTTTGCTAAAAATGGTGTAGTTACCATTAATGTTGATGCTATTGAAAA
ACCAATTTATATTGACCGGTTTCATTTGGAGGAAGATACTGCCAAACAAC
ACTTTAACCATGACCAAATTCTGCTTGATTTTAATAGGTGTGGTGCACCT
TTAATTGAAGTTGTTACTCTTCCTGTTATCAACACTGCAAAAGAAGCGAA
AGCCTACCTACAGAAGTTGAGACAAATTCTGATTGTTAACAATATCTCCA
ATGCCAAATTGGAAGATGGTTCAATGCGGAGCGATTGCAATGTTTCAGTA
CGTTTAAAAGGTCAAAGGCAACTAGGAACTAAAATTGAAATTAAAAACAT
CAACTCACTTAATAATGTTGAAAAAGCGATTGATCTTGAGATTAACCGCC
AAGTTAAAGCACTTATTAATGGTGAAACCTTGAGTCAAGCAACTTTAAGC
TTTGATGATAAAACCAACAACAATGTTTTTATGAGAAAAAAAGACAATAC
GATTGACTATAGGTACTTTATTGAACCTAACATCATGACTAGTAATATTG
ATGATTTATTATTAGAAAAACCTGTTGCTTTTCAGTTAGAACAGTTTCAA
AAAGAACTAATTGATAGTAATGTCAATCCTCAATTAGTCCAATTAGTAGT
TGATGATGCAACTATCTTTAGTGCTTTTCAAACTATTAATAGTGTGATTA
AAAACCCCCAAGAAACCATCAGGTGGTTATGTATTGAACTAATAGGTCAA
CTCAATAAAACCAACAGTTCATTAACAGCTAATTTAATTCAAGATCTAAT
TACCCTAATTGAAATGCTAAAAGCAGCAAAGGTTAACCAAAAACAAGCTA
AGCAGTTAATTACTTTAATGATTGAAACTAAAAAAGATCCAAAATCGCTA
GCTAAGCTCCATAATTTAGAGCAAATTACTGATCCAAAAGAGTTACAAAA
GATCATTAAAAAAATCTTTCAGGAAAATGAAAAAGAGATCCTGAAAAACA
TTGATAGAATTGAACGGATTCAAAAGTTAATTATTGGTCAAGTTATGCAT
AAGACCAATAATCGAGCAAACCCCCAACAAGTTTTTATAATTGTTGAAAA
TATGCTTCATGAAGTTCGGGAAAGAGATAGCTAA
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1434
View in model
Transcription unit TU_062 View in model
Empirical formula (pH 7.5) H15344C13909N5877O9921P1434
Molecular weight (pH 7.5; Da) 467985.90 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.369079 (dimensionless) (Show evidence)
View in model
Half life
8.6 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
14897900
pI 3.80
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:14
Last updated 2012-10-01 15:12:52