MG_080 – oligopeptide ABC transporter, ATP-binding protein

Name
WID MG_080 View in model
Name oligopeptide ABC transporter, ATP-binding protein View in model
Symbol oppF
Protein product MG_080_MONOMER
Cross references GenBank: AAC71298.1, CMR: MG_080, BioCyc: MG_080, SwissProt: P47326
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 104160111707 MG_078 MG_079 MG_080 MG_081 MG_082 MG_083 MG_084 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 106660 (nt), Length: 2547 (nt), Direction: Forward, G/C content: 31.9%, Sequence:
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2501
ATGGAAAACCAAAACACAAAAAAACCACTTGTTAATGTTAAGGCTTTGAG
CATGATGTTCAAGGTCAGAGGAACTCTTTTTAAAGCCCTTGATGAAATTG
GTTTTACTGTTAATGAAGGGGACTTCTTTGGGGTTATTGGTGAGAGTGGT
AGTGGTAAATCAACCACGGGAAAATGTTTGATTAGATTAAACATTCCTAG
TGGTGGAAAGATTGAGATTGCCAACCACTTACTCTCAGGAAAAAAACTTA
CTAAAGAGAATAACCAGTGGTTAAAACAAAACATCCAAATGGTGTTTCAA
GACCCTTATTCATCTATTAACCCTACTAAAAATGTGCTAACTGTGATTTC
AGAACCGCTGGTAATTAGTAAAACTGTTTTTGGGGAAACAAAACAATACT
TAAAGAGTTTGCAAAAGCTCTCTTTTAAAGTAAAGAAAACATTGTTAAGG
AATGATATTGAACTTGAAACCAAGTTTCACAATAACTTTTTTAAAACCGT
TATTAAGCAAATTAATGAATCATTGTTTAACTTTGAAGATCTTGATTACA
AGGATTTAAAACCATCACATTTAAGGCAAAGAATCATAAATGAAACAGAT
AAATTCATTGAAAAAATTAGAAGTGAGTTTGCCCTTTTTTATGATTTTTA
TGCTAACCAATCAGTACCCTTGCAAAAGGCATTAGATGATGCGAATTCCT
CTTTAACACCATCTAGTGTTATTGAGTTAAAAAACCAGTTAAAAGCATTA
CAAAAACAAGCAAAGATTTCAAAGGCAGCATGGGATATTTTACAAGCCCT
AAAGCAAAACCAAAAGGAGTTGAAAGATTATGAAAATTATGTCCATTTTG
AACTCCAAAAAAAGCCACGAATCTATCTTAATACCTGACTTTTAACAACC
AAAAGCTACATTAAAGATTCCAAGCAAAACATGCAGCTTACTGATGATAT
CTTTGCTTTTTCATATAACAGTATGGTTGACAAGAAAAGAAACTTGGTTT
TAATTCTTTCTAAATACTATAAGCTGTTACCTTATTTCTATGACCAATCA
GTATTTGATAATGCTGATCAATTTGATGAAATTGCTAACCTTATCTTTTT
TGATTTAGTTGAAACATTGCTTGGTGTAACTAGTTTATTTAATGATGCAT
TAGCAGCTGATAAAGTCCCACTAATTAAGTTTGCTAAGTTCTTAAATAAG
TTATGTGACTTGCGCTTTTTAACCTTAAAAAAGAGCTTTAAAAAAACAAG
AGTAAGTTGTAGCTTTAGTTTTAACAGTGAACCTGAAATCTTGTTTGCCA
ACAGCTGCTATGATTTGCAACAAATGCCTCAAATCATTAAACCCTTTTGA
GAGAAGCTTTTTAATGAACAGAACTACCAAAAGATTATTGATTCAGTTTC
AAGACTGAATGTAATGATTGCAAATTACATTACCAAAGCTTTTGAAATTA
AAAAAACTATTGATGAAAAACTAAGGGAGTTTAAACAACAAAATTTAGCT
TTAAAAAAAGCTTATTCAGCTAACAAGAAAAGTGAGGCAAACAAAGCTTC
CATTAATGAGTTAAAAGTCAATTTAAAAACACTTAAAAAACAGCTTAAAC
AAGAGAAAAATACTACTAAAAAACAATCAAAAAAGGAATTAAAACCACTT
TTAAAAGAACACCATACTGCTTTAAAACTCCATGATGAGTTTAACCATGA
TTTACGCAAGTGGTTCAAAAAACTTAACTTTATGGTTAAGAAATACAACC
GACTGGAAAACAGCCAGAAAAAGTTTTGTTTAGTTAAAAAGTTAAAAGCG
CTTTTCAAAAAACAGGATGAAACACTGCAAAGTGAATTAAGACCAAAACT
AAAAACATTTGGTGTAATTAACTTTGAGTACAAACGTGCAGTCAAAGAGT
CCAATGTCTTTCGATTGGTGCATTTTGCTAAAAATATCTTTAAACCATTC
TTGTTTTTTAACCTCACCAAGATTTTTATGAGAAATAAGGTCTATGAAGC
ACTTGATAGTGTTGGTTTAAAAAGAGAACATGCTTACAGATACCCCCATG
AATTTTCAGGCGGACAAAGACAAAGAATTGCTATTGCCCGTGCTTTAATC
ACTAAACCCAAACTGATTATTGCAGATGAATTGATTAGTGCACTTGATGT
TTCTATCCAAGCCCAAGTTATTAACATCTTGAAAGACTTGGCTAAAAAAC
ACAACTTAACTGTGCTTTTCATTGCCCATGATTTATCAATGGTGCAAACT
GTTTGTAACCGTTTGATCATTATGCATAGGGGCAAGATTGTTGAACGGGG
CAGTGTGGATGAGATCTTTTCAAATCCAGTTCATCCCTACACCCGTTCCC
TAATAAAAGCATCTCCTAAGTTAAGCAAAATCAATGTTGATCTCGCTTCT
TTTGATGAAAACTTCACTTATGATAGTGATTATTCACTAACCAATATGCC
CTTTTATATTAAAGTTCCTAACAGTGAAGAACATGAACTTTACTGTACTC
AAAAGCAATTTGATAGTTGAATCAAAGAGGCTACGCCGATAAATTAA
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2547
View in model
Transcription unit TU_051 View in model
Empirical formula (pH 7.5) H27242C24694N10407O17647P2547
Molecular weight (pH 7.5; Da) 831048.84 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.560583 (dimensionless) (Show evidence)
View in model
Half life
4.4 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
26340100
pI 3.83
 
Comments
Comments part of oppBCDF [PUB_0440];
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Ren Q, Chen K, Paulsen IT. TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels. Nucleic Acids Res 35, D274-9 (2007). WholeCell: PUB_0440, PubMed: 17135193, URL: http://membranetransport.org/

  4. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:13
Last updated 2012-10-01 15:12:49