MG_077 – oligopeptide ABC transporter, permease protein

Name
WID MG_077 View in model
Name oligopeptide ABC transporter, permease protein View in model
Symbol oppB
Protein product MG_077_MONOMER
Cross references GenBank: AAC71295.1, BioCyc: MG_077, CMR: MG_077, SwissProt: P47323
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 100604106828 MG_075 MG_076 MG_077 MG_078 MG_079 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 103104 (nt), Length: 1224 (nt), Direction: Forward, G/C content: 34.1%, Sequence:
1
51
101
151
201
251
301
351
401
451
501
551
601
651
701
751
801
851
901
951
1001
1051
1101
1151
1201
ATGTTCAAGTATATTCTTAAACGATTAGGACTAGCAGTAGTTGCGATGTT
TATCGTAATGTCTATAGTCTTCTTTTTAGTGAACGCTACTGGTAATGTTC
CCTTGTCAGCCACTTCTGCAAGAGATATTGCTGCAGTGCAAGCACAACTA
CAAGAGTTTGGGTTTAATGACCCTATTATAGTTAGGTATTTTCGCTATTG
AGCTAAGCTATTTTCCTTTCAAGCTGATGCTTTAGGAATTTATTATGCAA
ACCCTAACCAAACAATTGGTGAGATTGTGTTTGCAAGAGTACCAAATACC
TTATATGTGGTTTTAATCTCTTTTTTAATTGGTTCATTGCTAGGGATCTT
TTTAGGGATGGTTTCAGGATTGAATAGAGGGAAGTTTTTAGATGCAGCAA
TTAATGTGTTGGTAGTTTTATTTGTATCTATTCCTTCATTTGTAGTGGGA
TTAGGGTTACTTAAACTAGCAGGATTTTTAAATCTACCACCACGGTTTAT
TAACTTTGATGATGCTTTTTTTAGCTTTGATCGTTTCTTGCTTGCATCAA
TTATCCCGATCCTTTCATTGGTCTTCTATTCATCAGCTGCTTTTACATAC
AGGATTAGAAATGAGGTGGTGGAAGTGATGAATCAAGACTATATTAAAAC
TGCAAAAAGTAAGGGACTTGGGATGTTTGCTGTAGCTAGGTATCATATCT
TTAGAAACTCGATTATTCCTTCTATTCCCTTGTTTGTATTTGGAATCTCA
GGTGCTTTTTCAGGTGGATTTATTATTGAGTCTTTGTTTGGAGTACAAGG
GGTATCTAGGATCTTAATTGATTCAGTGCAAGTTAATGAAACTAACATGG
TAATGTTTAATATCTTGTTTATCCAAGGGATTCCCTTATTAGCAAGTGTC
TTTATTGAATTTATCTATGTTTTAGTTGATCCTAGAATTAGGATTGCAAA
TAGTTCTAATGTTAGCTTATTAACTAAGTTAAAGTTCTTAAGTTCAAGAC
ACCAATGGTTAATGAAGTGAAACAAGATTAACAGTGATAATGCCCAAAAT
ATTGTGTTTAACTCGCCACTGCACCACCAGCTATTAGAACTCAATGCAAT
TGATTACAAAACAAAAACAGTTCAACTAACAACTGAACAAAAAACTGCTC
TCAATATCAGTGCAACTGCTAACTTTATCTTACTTGGTAACAAGTGTTTA
AAACTCAAAACAATCCATGGATAG
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1050
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1150
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1224
View in model
Transcription unit TU_051 View in model
Empirical formula (pH 7.5) H13016C11791N4773O8660P1224
Molecular weight (pH 7.5; Da) 398057.70 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.560583 (dimensionless) (Show evidence)
View in model
Half life
2.9 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
12469900
pI 4.49
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:13
Last updated 2012-10-01 15:12:49