MG_051 – pyrimidine-nucleoside phosphorylase

Name
WID MG_051 View in model
Name pyrimidine-nucleoside phosphorylase View in model
Symbol pdp
Protein product MG_051_MONOMER
Cross references GenBank: AAC71267.1, CMR: MG_051, BioCyc: MG_051, SwissProt: P47297
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 5724063506 MG_048 MG_049 MG_050 MG_051 MG_052 MG_053 MG_054 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 59740 (nt), Length: 1266 (nt), Direction: Forward, G/C content: 30.0%, Sequence:
1
51
101
151
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351
401
451
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601
651
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951
1001
1051
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1151
1201
1251
ATGAATATCATTAATTTAATTAATAAAAAACAACGCGGAAAAGCTTTAAA
TTTAGCTGAAATCAATTGGTTTGTTAATGCTGTTTTAAACAAAACCATTG
CTGATTATCAAATTACTGCATTTTTGATGGCTATTTGGTTTAAAGGGATG
AACCCAAATGAACTTTTTTTATTAACAAAAGCAATGGTGGATACTGGTGA
AATTATTAAGTTTAATCACCATGGCAAGATTAGTGTTGATAAACATTCAA
CTGGTGGTATTGGTGATAAGGTTTCTTTAGCATTGGTTCCTATCTTAACT
AGTTTAGGATTTAGTGTTGCTAAATTATCAGGAAGAGGCCTTGGTTATAC
TGGTGGAACAATTGATAAATTAGAAGCAGTTGGAGTTAAAACAGAATTAA
CTGACCAACAAGCACAAGCATGTTTAGATAAAAATGATTGTTTTATCATC
GGACAAAGTAAGGACATCGCACCAGTTGATAAAGTACTTTATGGTTTAAG
AGATATTACTGGAACAGTTGATAGTTTGCCTTTAATTGCATCTAGTATTA
TGTCTAAAAAGCTAGCAGTTATGAACGAGTATATTTTCATTGATCTTAAA
TATGGAAAAGGTGCCTTTTGTAAAACTAAGAAAATTGCTAACGAACTTGC
AAAACTGATGCAAAGTATTGCTAAAAGTTTTAAAAGAAAGCTGTCTGTTA
AATTAAGTGATATGAATCAAGTACTTGGTAAAGCTGTTGGCAATGTAATT
GAAGTTAATGAAGCTGTTAACTTTCTAAAACAAGATTTAGATCAAGTAGG
ACAAGATTTTATTGATTTAATGCAAACAATTGTTATTAACATTCTACTTG
AAACAAAACAAGCAAAAACCAAACAAAAGGCTATTGAACTTTATCAGGAT
GTTTTAACTAGTAAAAAAGCATGAAATCGCTTTTTATCTTTTATTGAATC
TCAAGGAGGAAATGTTGAATTATTTACTCAAAAAGAAGGTTTTTTTAAAC
CTAAGTATAAGGCATCTATAAAAGCTGAAAAAAGTGGTATACTACATTTT
ACTGATCCAATTGATTTAGCTAAAATTGGGATTAATCTAGGGGCAGGTAG
GATGAAGAAAACAGATCAAATTGATCCAATGGCAGGGTTATTTTTAATGA
AAAAAGATAATGAGTCTGTGGCAGTTGGAGACACTGTATTAAACCTGTAT
AGTTCTAGTCCTATTAGCAATGAATATATCTCTGCTGCTCAAAAAACAAT
AATTATTAATAAATAA
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1250
1266
View in model
Transcription unit TU_029 View in model
Empirical formula (pH 7.5) H13513C12246N5088O8805P1266
Molecular weight (pH 7.5; Da) 412056.42 View in model
 
Functional genomics
Is essential
No (Show evidence)
View in model
Relative expression
1.96428 (dimensionless) (Show evidence)
View in model
Half life
15.8 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
13262300
pI 3.99
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:12
Last updated 2012-10-01 15:12:45