MG_042 – spermidine/putrescine (polyamine) ABC transporter, ATP-binding protein, putative

Name
WID MG_042 View in model
Name spermidine/putrescine (polyamine) ABC transporter, ATP-binding protein, putative View in model
Symbol potA
Protein product MG_042_MONOMER
Cross references GenBank: AAC71258.1, CMR: MG_042, BioCyc: MG_042, SwissProt: P47288
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 4734054020 MG_040 MG_042 MG_043 MG_044 MG_045 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 49840 (nt), Length: 1680 (nt), Direction: Forward, G/C content: 29.2%, Sequence:
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TTGAACGAACATTCTTTAATTGAAATTGAAGGTTTGAACAAGACCTTTGA
TGATGGTTATGTTTCTATAAGAGACATTAGCCTAAATATTAAAAAAGGCG
AATTTATTACTATTTTAGGCCCTTCTGGTTGTGGTAAAACTACCCTGTTG
AGGTTATTAGCTGGATTTGAAGATCCTACTTATGGCAAGATCAAAGTTAA
TGGTATTGACATTAAAGACATGGCAATCCATAAGCGTCCTTTTGCGACAG
TTTTTCAAGACTATGCTTTATTTTCCCATCTAACTGTTTATAAAAACATT
GCTTATGGTCTGAAGGTAATGTGAACAAAGTTAGATGAAATTCCAAAACT
TGTAAGTGATTATCAAAAGCAACTTGCTCTTAAGCATTTAAAGCTAGAAA
GAAAAATAGAGCAGTTACAAAAAAACAATTCTAATGCTCAAAGAATAAAG
AAATTAAAGGAAAAATTACAAAAACTTTTAGAAATTAACAAACAAAAAGT
TATTGAGTTTGAAAATAAAGAAAAACTACGTAGAGAAGATATTTACAAGA
ATTTAGAGCAATTAACAAAAGAATGGGATCTACTTTCTCAAAAGAAACTA
AAAGAAGTTGAACAACAAAAACAAGCAATTGATAAAAGTTTTGAAAAAGT
AGAGAATAAATACAAAAAAGATCCTTGGTTTTTTCAACACAGTGAAATAC
GTTTAAAACAATATCAGAAGAAAAAAACTGAGTTGAAAGCTGATATTAAA
GCAACAAAGAACAAAGAACAAATCCAAAAATTAACTAAAGAACTTCAAAC
CTTAAAACAAAAATACGCTAATAAAAAAGCAATTGACAAAGAGTATGACA
AATTAGTTGTAGCTTACAATAAGAAAGACTATTGAACTTCTTATTGAGAA
ACATACACACTTCAACAAAAAGAAGCTTTTGAAAAACGTTATCTTTCAAG
AAAACTAACTAAAGCTGAACAAAATAAAAAAGTTAGTGATGTTATTGAAA
TGGTTGGTTTAAAAGGTAAAGAAGATCGTTTGCCTGATGAATTATCAGGG
GGAATGAAACAAAGAGTTGCTTTAGCACGTTCTTTAGTAGTAGAACCTGA
AATTCTTTTATTAGATGAACCATTATCTGCACTTGATGCAAAGGTTAGAA
AGAATTTACAAAAAGAATTACAACAGATTCATAAAAAAAGTGGATTGACT
TTTATCTTAGTAACTCATGATCAAGAAGAGGCTTTAGTTTTATCAGATCG
GATAGTGGTTATGAATGAGGGAAACATCTTACAAGTTGGTAATCCTGTTG
ATATTTATGACTCTCCTAAGACTGAATGAATTGCTAATTTCATTGGTCAA
GCTAACATCTTTAAAGGTACTTATTTAGGAGAAAAAAAGATTCAGTTACA
GAGTGGTGAAATCATTCAAACTGATGTTGATAATAACTATGTTGTAGGTA
AGCAATATAAGATCTTAATTCGTCCTGAAGACTTTGATCTTGTTCCTGAA
AATAAAGGTTTTTTTAATGTTCGTGTTATTGATAAAAACTACAAAGGATT
GCTTTGAAAGATAACCACACAATTAAAAGATAACACTATTGTTGATTTGG
AGAGTGTTAATGAAGTTGATGTAAATAAGACCTTTGGTGTTTTATTTGAT
CCTATAGATGTTCATTTAATGGAAGTTTAA
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View in model
Transcription unit TU_025 View in model
Empirical formula (pH 7.5) H17975C16294N6882O11584P1680
Molecular weight (pH 7.5; Da) 547586.49 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
4.4 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
17737700
pI 3.79
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:11
Last updated 2012-10-01 15:12:43