MG_036 – aspartyl-tRNA synthetase

Name
WID MG_036 View in model
Name aspartyl-tRNA synthetase View in model
Symbol aspS
Protein product MG_036_MONOMER
Cross references GenBank: AAC71252.1, BioCyc: MG_036, CMR: MG_036, SwissProt: P47282
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 3927645929 MG_033 MG_034 MG_035 MG_036 MG_037 MG_038 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 41776 (nt), Length: 1653 (nt), Direction: Forward, G/C content: 30.2%, Sequence:
1
51
101
151
201
251
301
351
401
451
501
551
601
651
701
751
801
851
901
951
1001
1051
1101
1151
1201
1251
1301
1351
1401
1451
1501
1551
1601
1651
ATGTGTTTTAACCAACGAATTTTAATTGGCTCAATTTCAACTGAACAACT
CAATAAAACAATAGTTATTATTGGGTGAATTAAACGGATTAAAAAGTTAG
GTGAAATTAACTTTATTATCGTTGGTGATAAATCAGGAACTATCCAAGTA
ACTTGCAAAGATAAAGAACAGATTCAACAACTTACAAGAGAAGACATAGT
TATTGTTAAAGCCAAATTACAACGCTTAGATAGTGTTAGATTTGAACTGA
TAAATCCAACTATTAAACTTTTTTCAAAGTCAAAAACTCCTCCTTTAATT
ATTGAAGATGAAACTGATGCTTTAGAAGAAGTTAGGTTAAAATACCGTTA
CCTTGATCTGAGAAGACGTTTGATGCAAAAACGATTGTTATTGCGTCATC
AATTTATATTAGCAATTCGTAACTGATTTAACCAGCAGGGTTTTATTGAA
ATAGAAACACCTACCTTATCCAAATCAACTCCTGAGGGAGCACAAGACTT
TTTAGTTCCTGCAAGAATTAGAAAAGATTGTTTTTATGCTTTAGTTCAAA
GTCCACAAATCTATAAGCAGCTCTTAATGATTGCAGGAGTTGAAAAATAT
TTTCAAATTGCAAGGGTCTATCGTGATGAAGATAGCAGAAAAGATCGTCA
ACCAGAACACACACAAATTGATTTCGAGATCTCTTTTTGTAACCAAAAAA
TGATTATGAATCTAGTTGAAAAACTCTTTTTTAGTGTTTTCTTAGATGTT
TTTCAAATCAAAATAAAAAAGACTTTTCCTGTTTTTAAATTTTCAGAACT
TTTTGAAAGATTTGGTAGCGATAAACCAGATTTACGTTATGGTTTTGAAA
TAAAAGATTTCACCTCGCTTTTTCAAGATCATCAGAATCAGTTCACTAAA
TTAATTGAAGCAAAAGGCATTATTGGTGGTATTGAACTTACTAATATTGA
GTTAAGTACAGACAAAATTAAAGCATTAAGAAAAATTGCTAAGGACCATG
ATGTGAGTTTAGAAGTTCATAATAAAAATAATTCAACATTAAAAACTTCA
ATTAAATGTGATGAAAAAAACACTCTTCTGTTAGTAGCAAATAAATCTAA
AAAGAAGGCATGAACTGCTTTAGGAGCAATTAGAAATGAGTTGAAATACC
ACTTGGATATTGTCAAACCTAACCAATACAGCTTTTGTTGAGTTGTTGAT
TTCCCTCTCTATGATTTTGATGAGAAAACAAATCAGTGAATATCAAATCA
CAACATCTTTTCAAAACCTAAACAAGAATGAATTGATAATTTTGAATCAA
ATAAAAACGAAGCATTAAGCGAACAGTTTGATCTTGTTTTAAATGGTTTT
GAAATTGGTAGTGGTTCAATAAGAATTAATGATCCAATTGTTCAAAAAAG
ACTAATGAATTCTTTGAACATTGACCCAAATAAGTTTGCTTTTCTTCTAG
AAGCTTATCAATATGGTGCTCCTGTTCATGGTGGAATGGGACTAGGTATT
GATCGTTTAATGATGATTCTTAATCAAACTGATAACATCAGAGAAGTAAT
CGCTTTTCCTAAGAATAATCATGGTATTGAAGTCCATACAAACGCTCCTG
ATAAAATTGACAAAGAGGAGGTTAAATGATGGATAAAAGAACTAGTGAAA
TAG
50
100
150
200
250
300
350
400
450
500
550
600
650
700
750
800
850
900
950
1000
1050
1100
1150
1200
1250
1300
1350
1400
1450
1500
1550
1600
1650
1653
View in model
Transcription unit TU_019 View in model
Empirical formula (pH 7.5) H17655C16001N6678O11476P1653
Molecular weight (pH 7.5; Da) 538323.23 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
3.2 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
17255400
pI 3.92
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:11
Last updated 2012-10-01 15:12:42