MG_034 – thymidine kinase

Name
WID MG_034 View in model
Name thymidine kinase View in model
Symbol tdk
Protein product MG_034_MONOMER
Cross references GenBank: AAC71250.1, BioCyc: MG_034, CMR: MG_034, SwissProt: P47280
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 3737243014 MG_032 MG_033 MG_034 MG_035 MG_036 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 39872 (nt), Length: 642 (nt), Direction: Reverse, G/C content: 32.7%, Sequence:
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51
101
151
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451
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551
601
ATGGGTAAATATCAACCATCTTTTCAAACCAAAAAGGGCTGAACTGAAGT
TATTTGTGGCCCAATGTTTTCTGGAAAAACAGAGAAATTACTTCACAAAA
TAAAACGGTGAAAGATAGCCAAAATTTCAGTTGTTATCTTCAAACCAATA
ATTGATACTAGACAAACTAATATTGTCAAATCACGCAACGGTGAATATGA
TCAAGCAATAACTATTAATTCTCCTTTTGAGATCTATGATCACTTAGTTG
ATAAAAACTATCAAATTGTTGCCATTGATGAAGCACAATTCTTTTCAAAT
GAGATTATAGAAGTTGTTACAACTCTCAATGAGATAGGAACAAATGTAAT
TATTTCTGGGCTTGATACTGATTTTAGAGCTGAGCCTTTTGGTTGTATTC
CCCAACTTTTAGCAATAGCTGATGTAGTTAATAAACTTGATGCTATTTGC
AATGTTTGTGGTAGTTTAGCACAACGAACCCAAAGACTAGTAAATAAAAA
TACTAATGATAACCTTGTCTTAATTGGTGATGCAGAAGCTTATGAAGCTA
GATGCAAACTGCACCACTCATTTTTAACTAAAAAGCACGTTACTGTTAAA
ACCAAAAACTTTAAAGAACAGGTGCAGGGGAAAACCCAATAA
50
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350
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642
View in model
Transcription unit TU_017 View in model
Empirical formula (pH 7.5) H6869C6226N2628O4451P642
Molecular weight (pH 7.5; Da) 209610.00 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
2.98349 (dimensionless) (Show evidence)
View in model
Half life
5.2 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
6614000
pI 3.84
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:11
Last updated 2012-10-01 15:12:42