MG_022 – DNA-directed RNA polymerase, delta subunit

Name
WID MG_022 View in model
Name DNA-directed RNA polymerase, delta subunit View in model
Symbol rpoE
Protein product MG_022_MONOMER
Cross references GenBank: AAC71238.1, CMR: MG_022, BioCyc: MG_022, SwissProt: P47268
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 2353628974 MG_020 MG_021 MG_022 MG_023 MG_024 MG_025 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 26036 (nt), Length: 438 (nt), Direction: Forward, G/C content: 30.4%, Sequence:
1
51
101
151
201
251
301
351
401
ATGCAATTAGAGTACCTCAATCTTATTTCTCAAGCTAAAGTTATTGCAGA
AAAACAATTTAAAGCTAACCCTTTTTCTTTTGAAACAATTTGAAAAGAAG
TAGTTAAACATTTCAAGATTTCAAAACAAGATGAACCAAGCTTAATTGGT
CGTTTTTATCAAGATTTTCTTGAGGATCCTAACTTTGTCTATTTAGGTGA
TAGAAAATGAAAACTTCGTGATTTTATGAAGTTTGATGAATGGAACAAGA
TATCACAATCTATGTTTGTTACAAAGGAGATTTTTGAAGAAGGTTATGAA
GATCTTTCCAATAAAAAAGTAGAACCTGAGGAAGGAGTTGGTGATTTCAT
TATGGGAAATGATGGTGATGACAATGAAACTGGCAGTGAAATAGTACAAG
GTTTAATTAATGATTCATTCAGTGAGGAAAATCAATAG
50
100
150
200
250
300
350
400
438
View in model
Transcription unit TU_011 View in model
Empirical formula (pH 7.5) H4677C4238N1764O3046P438
Molecular weight (pH 7.5; Da) 142623.81 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
5.89708 (dimensionless) (Show evidence)
View in model
Half life
4.425 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
4587100
pI 3.99
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:10
Last updated 2012-10-01 15:12:40