MG_007 – DNA polymerase III delta prime subunit, putative

Name
WID MG_007 View in model
Name DNA polymerase III delta prime subunit, putative View in model
Symbol holB
Protein product MG_007_MONOMER
Cross references GenBank: AAC71223.1, CMR: MG_007, BioCyc: MG_007, SwissProt: P47253
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 665612418 MG_004 MG_005 MG_006 MG_007 MG_008 MG_009 MG_010 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 9156 (nt), Length: 762 (nt), Direction: Forward, G/C content: 24.8%, Sequence:
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51
101
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601
651
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751
ATGCTTACAACAACCCACGCATTACTAATCATTCAAAGAAAAGGTAGTTT
CTTAAAACCTTTTCTTGATAATTATCTTACTAGTATTGTTTGTGAAAACA
AAAATGGTTGCAAAAAGTGTATAAACTGTTTGGAAATTCTCAATAATAAA
TACAACAGCTTATATTGATTTGATCAAATTAATCCTTTCAAAAGAGAAAA
TGCCCTTCAGTTAGCAAGAATTTTTAACCGTGAAAGAACAAGTGTAAACA
ATAAAAATATTTATCTAATTGAAGAAATTGAAAAATTAAGCAGTAATTCT
ATAAATAGTTTATTGAGACTAGTTGAAGATAGTCCGATAAATAGTTATGG
TATTTTTACAACTAAAAATGAAAGTTTAATTCTTTCCACTTTTTTAAGTA
GAGTACAGAAAGTAGTTTTAAAAAAAGCTAGTAAAGTTCCTTTTAAAGTA
AGCAAAAATGATCAAGAAATTATTACAAGTTTTTTTACTGTAGATGAACA
AATTGAAGCAATTGAAAATGGAAGTTTTAACCGTTTCAAAATTATCTTAG
ATGCATGTTTAAACAAAAAAACAGGTACAGAACAAATTTATCATGCTTGA
CAAATTTTTAGAGATTTTTCTAATAGTGAAATTGCTCAGTTAATTACTCT
AATAATTAATAAAACTGAAAATATAGATAAAAAATCAATTTTGTTTAATT
GTTTAAAAGTTTTGCCATATAATCCTCCAAAATCCACTTTGTTTGCTAAT
TTAGTTAGTTGA
50
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762
View in model
Transcription unit TU_003 View in model
Empirical formula (pH 7.5) H8120C7357N3021O5288P762
Molecular weight (pH 7.5; Da) 247067.97 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.560583 (dimensionless) (Show evidence)
View in model
Half life
2.9 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
8044500
pI 3.97
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:10
Last updated 2012-10-01 15:12:38