MG_005 – seryl-tRNA synthetase

Name
WID MG_005 View in model
Name seryl-tRNA synthetase View in model
Symbol serS
Protein product MG_005_MONOMER
Cross references GenBank: AAC71221.1, CMR: MG_005, BioCyc: MG_005, SwissProt: P47251
Homologs
 
Classification
Type mRNA View in model
 
Structure
Structure 479411048 MG_004 MG_005 MG_006 MG_007 MG_008 View in model
Sequence Chromosome: Mgenitalium_Chr_1, Coordinate: 7294 (nt), Length: 1254 (nt), Direction: Forward, G/C content: 30.6%, Sequence:
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51
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ATGTTGGATCCAAACAAATTACGCAATAACTATGATTTCTTTAAAAAGAA
ACTGTTAGAAAGAAATGTAAATGAGCAATTATTAAATCAGTTTATTCAAA
CTGATAAACTAATGCGCAAAAACTTGCAACAACTTGAACTTGCTAACCAA
AAACAAAGCTTGTTGGCAAAACAAGTTGCTAAGCAAAAAGATAATAAAAA
GCTATTAGCTGAATCAAAAGAACTTAAGCAGAAGATTGAAAACTTAAATA
ATGCTTATAAAGATTCACAAAACATTAGTCAAGATTTACTTCTAAATTTT
CCTAATATTGCTCATGAATCAGTTCCTGTTGGTAAAAATGAATCAGCAAA
CTTAGAACTTCTTAAAGAAGGGAGAAAACCAGTTTTTGATTTCAAACCTT
TACCACATCGAGAGTTATGTGAAAAGTTAAATTTAGTTGCTTTTGATAAA
GCTACTAAGATTAGTGGAACTAGGTTTGTTGCATATACAGATAAAGCAGC
TAAACTACTTAGAGCGATAACTAATCTAATGATTGACCTTAATAAAAGCA
AGTATCAAGAATGAAACCTGCCAGTTGTTATTAATGAATTAAGTTTAAGA
TCAACCGGACAACTACCTAAGTTTAAAGATGATGTTTTTAAACTAGAAAA
CACCCGTTATTATCTTTCTCCAACTTTAGAGGTACAACTTATCAATTTAC
ATGCTAATGAAATTTTTAATGAAGAAGATTTACCTAAATACTACACTGCA
ACAGGTATTAACTTTCGTCAAGAAGCGGGTAGTGCTGGTAAACAAACCAA
AGGAACTATTAGATTGCATCAGTTTCAAAAAACTGAGTTAGTTAAGTTTT
GTAAACCTGAAAATGCTATCAATGAATTGGAAGCAATGGTTAGAGATGCT
GAACAAATCTTAAAGGCACTTAAGTTACCTTTTAGAAGGTTATTGTTATG
TACTGGTGATATGGGCTTTAGTGCTGAAAAAACATATGATCTTGAAGTTT
GAATGGCAGCTAGCAATGAATATCGTGAAGTTTCTTCTTGTTCATCTTGT
GGTGATTTTCAAGCAAGAAGAGCTATGATTCGTTACAAAGATATTAACAA
CGGTAAAAACAGTTATGTTGCTACTTTAAATGGAACAGCATTATCTATTG
ATAGAATTTTTGCTGCAATTCTAGAAAATTTTCAAACAAAAGATGGCAAA
ATTCTTATCCCACAAGCATTAAAAAAATACCTTGATTTTGACACAATCAA
GTAA
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1254
View in model
Transcription unit TU_003 View in model
Empirical formula (pH 7.5) H13412C12157N5121O8675P1254
Molecular weight (pH 7.5; Da) 408896.29 View in model
 
Functional genomics
Is essential
Yes (Show evidence)
View in model
Relative expression
0.851454 (dimensionless) (Show evidence)
View in model
Half life
2.6 (min) (Show evidence)
View in model
Extinction coefficient 
(260 nm, 25C, pH 7.0)
13072000
pI 3.83
 
Comments
References
  1. Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci U S A 99, 9697-702 (2002). WholeCell: PUB_0602, PubMed: 12119387

  2. Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, Maruf M, Hutchison CA 3rd, Smith HO, Venter JC. Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103, 425-30 (2006). WholeCell: PUB_0193, PubMed: 16407165

  3. Weiner J 3rd, Zimmerman CU, Göhlmann HW, Herrmann R. Transcription profiles of the bacterium Mycoplasma pneumoniae grown at different temperatures. Nucleic Acids Res 31, 6306-20 (2003). WholeCell: PUB_0569, PubMed: 14576319

 
Metadata
Created 2012-10-01 15:07:10
Last updated 2012-10-01 15:12:38